| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0610 |
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| Symbol | |
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| ID | 3903478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 693356 |
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| End bp | 694405 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637877943 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_479723 |
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| Protein GI | 86739323 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.296446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG CTCAGCGTCC CACCCTCATC GAAGACCCGA TCTCCGAGTT CCGTTCACGC
TTCGTGATCG AGCCGCTGGA GCCGGGCTTC GGCTACACCC TCGGTAACTC GTTGCGCCGG
ACCCTGCTGT CCTCCATCCC AGGTGCCTCG GTCACCAGCA TCCGCATCGA CGGCGTGCTG
CACGAGTTCT CCACCGTGCC CGGCGTCAAG GAGGACGTGA CCGACCTGAT CCTGAACCTC
AAGGAACTGG TCGTCAGCTC CGACAACGAC GAGCCGACCG TGATGTACCT GCGCAAGCAG
GGCCCCGGCG AGGTCACGGC GGCGGACATC GCCCCGCCGG CGGGCGTCGA GGTGCACAAC
CCCGAGTTGC GGCTCGCCAC TCTGAACGAC AAGGGCAAGC TTGAGATCGA GCTGACCGTC
GAGCGGGGGC GCGGGTATGT CAGCGCGGCC CAGAACAAGC AGGCCGGCCA GGAGATCGGG
CGGATCCCGA TCGACTCGAT CTACTCGCCG GTGCTGAAGG TGACCTACAA GGTCGAGGCG
ACCCGCGTCG AGCAGCGGAC CGACTTCGAC CGGCTCATCG TTGACGTCGA GACCAAGCCG
TCGATCTCCC CGCGAGACGC GATGGCCAGC GCCGGCAAGA CCCTGGTCGG CCTGTTCGGG
CTGGCTCAGG AGCTCAACGC CGAGGCGGAG GGCGTCGACA TCGGCCCGTC CGCCGCGGAC
GCGGCGCTGG CGGCCGACCT TGCGCTGCCC ATCGAGGAGA TGGACCTGAC CGTCCGCTCC
TACAACTGCC TCAAGCGTGA GGGCATCCAC ACGATCGGCG AGCTGGTCTC CCGTAGCGAG
GCCGACCTGC TCGACATCCG TAACTTCGGG CAGAAGTCGA TCGATGAGGT CAAGACGAAG
CTGGGCGCGA TGGGCCTGCA GCTCAAGGAC TCCCCGCCCG GGTTCGACCC GCGCCAGGCG
GTGGACACCT ACGGCACCGA CGCGTACAGC CCGTCGTTCT CCGACCCGTC CGACGACGGC
GCGGAGTTCA TCGAGACCGA GCAGTACTGA
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| Protein sequence | MLIAQRPTLI EDPISEFRSR FVIEPLEPGF GYTLGNSLRR TLLSSIPGAS VTSIRIDGVL
HEFSTVPGVK EDVTDLILNL KELVVSSDND EPTVMYLRKQ GPGEVTAADI APPAGVEVHN
PELRLATLND KGKLEIELTV ERGRGYVSAA QNKQAGQEIG RIPIDSIYSP VLKVTYKVEA
TRVEQRTDFD RLIVDVETKP SISPRDAMAS AGKTLVGLFG LAQELNAEAE GVDIGPSAAD
AALAADLALP IEEMDLTVRS YNCLKREGIH TIGELVSRSE ADLLDIRNFG QKSIDEVKTK
LGAMGLQLKD SPPGFDPRQA VDTYGTDAYS PSFSDPSDDG AEFIETEQY
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