Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0602 |
Symbol | secY |
ID | 3905885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 687753 |
End bp | 689045 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637877935 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_479715 |
Protein GI | 86739315 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.637505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCACCG CCTTCACGCG GGCATTCCGC ACGCCTGACC TGCGCAAGAA GCTGCTGTTC ACCGTCGGTA TCGTGATGCT GTTCCGGTTC GGCAGCGTCA TGCCGTCGCC GGGTGTCTCG ACGTCCGCAG TGAACACCTG CCTGGACTCG GCGAGTGCCG ACAGCAGCAA CGTCTACTCG CTGATCAACC TGTTCAGTGG TGGGGCTCTG CTGCAGCTGT CCATCTTCGC GCTTGGCATC ATGCCGTACA TCACATCGAG TATCATCATT CAGTTGCTCG TTGTGGTGAT CCCTCGGCTG GAGCAGCTGA AGAAGGAGGG CAGCTCGGGC GAGCAGAAGC TTACGCAGTA CACCCGGTAC CTGACGATCG CCCTCGGTCT TCTGCAGGCC ACCGGCATCG TGGCGCTGGC CCGCAGCGGC CGGCTGTTCC CCAGCTGTTC GGCCGCCATC ATCCCGGACA CGAGCCTGTT CCGGATCGCG ACGATTGTCA TCACGATGAC GGCGGGTACC TCGGTCATCA TGTGGATGGG TGAGTTGATC ACCACCCGGG GGGTCGGTAA CGGCATGTCG CTGCTGATCT TCACCTCGAT CGCGGCAAGG CTTCCCTCCG AGGGCGGACG CATCCTCCAG GTCGCCGGCG GTGTGGTGTT TAGCCTGGTG CTCCTGCTCG GTCTCGCGAT CGTCGTGTTC GTCGTGTTCG TCGAGCAGTC TCAGCGTCGC ATCCCGGTCC AGTACGCCAA ACGCCTGATC GGGCGGCGGA TGTACGGCGG GACGTCGACC TACCTGCCGA TCAAGGTCAA CCAGGCCGGG ATCATCCCCG TCATCTTCGC GTCCTCGCTG CTGCAGCTCC CTCAACTCGC CGGGCAGGTA TGGAGCAACC GGAGCTTCCA GGACTTCGAG CAAAGATATC TCTCCAGGGG AGACCATCCA CTCTATCTGG TGACATACTT CGCACTCATC ATCTTCTTCA CCTATTTTTA TGTTGCGATC ACCTTCAACC CAACGGAGGT CGCGGACAAC ATGAAGAAGT ATGGTGGGTT CATCCCCGGG ATCAGGCCGG GGAACCCGAC GGCGGAGTAC CTCAAACATG TACTCGACCG GATCACGCTC CCGGGATCGC TGTTCCTTGG CGTGATCACG GTCCTTCCGT TGGCACTGTT GAACCTGACC AAGGACCAGC CGTTCCCCTT CGCGGGCACG TCGGTCCTGA TCATGGTGGG GGTTGGGCTG GAAACCGTGA AGCAGATCGA AAGCCAGCTC ATGCTCCGCA ATTACGAAGG TTTCCTCCGG TAG
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Protein sequence | MLTAFTRAFR TPDLRKKLLF TVGIVMLFRF GSVMPSPGVS TSAVNTCLDS ASADSSNVYS LINLFSGGAL LQLSIFALGI MPYITSSIII QLLVVVIPRL EQLKKEGSSG EQKLTQYTRY LTIALGLLQA TGIVALARSG RLFPSCSAAI IPDTSLFRIA TIVITMTAGT SVIMWMGELI TTRGVGNGMS LLIFTSIAAR LPSEGGRILQ VAGGVVFSLV LLLGLAIVVF VVFVEQSQRR IPVQYAKRLI GRRMYGGTST YLPIKVNQAG IIPVIFASSL LQLPQLAGQV WSNRSFQDFE QRYLSRGDHP LYLVTYFALI IFFTYFYVAI TFNPTEVADN MKKYGGFIPG IRPGNPTAEY LKHVLDRITL PGSLFLGVIT VLPLALLNLT KDQPFPFAGT SVLIMVGVGL ETVKQIESQL MLRNYEGFLR
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