Gene Francci3_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0565 
Symbol 
ID3905788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp655981 
End bp656409 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content68% 
IMG OID637877897 
ProductMaoC-like dehydratase 
Protein accessionYP_479678 
Protein GI86739278 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGGTGAGCTA CGACGACGTC GAGGTCGGCA CCGAGCTGCC GGAGCGACTT 
TTCCCGTTGC GTCGGGATGA TCTTGTCCGG TATGCCGGTG CGTCCGGCGA CTTCAACCCC
ATTCACTGGA GCGATCGGGC GGCCGCCGAG GCCGGCCTAC CGGGAGTGCT GGCGCACGGC
ATGCTGACCA TGGCGACGGC CGCGCGGTTG GTCACGGACT GGCTCGGGGA CCCGGGCGCC
GTGGTCGAGT TCGGGGTGAA GTTCTCCTCC CCGGTGATCG TGCCCGACGA CGGCGCCGGC
GCGACGGTGT CCGTGCGTGG CATGGTCGAG AAGAAGCTCG ACGACAACCT GGTGGTGGTG
AATCTCACCA CCCGATGCGA CGGAAAAAAG GTCTTGATGG CGGCCCGGGC GACCGTCCGG
CTGCGCTGA
 
Protein sequence
MTATVSYDDV EVGTELPERL FPLRRDDLVR YAGASGDFNP IHWSDRAAAE AGLPGVLAHG 
MLTMATAARL VTDWLGDPGA VVEFGVKFSS PVIVPDDGAG ATVSVRGMVE KKLDDNLVVV
NLTTRCDGKK VLMAARATVR LR