| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0543 |
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| Symbol | |
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| ID | 3904194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 629203 |
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| End bp | 630534 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877872 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_479656 |
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| Protein GI | 86739256 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.315884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.338133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCA CCCCGGTCCT CACCCGGCGC TGGAACACGC CGGAGTCGTG GACGATCGAG
ACCTACACCC GCCTCGACGG CTACACCGCG CTGCGCACCG CCTTCGCGAT GGCCCCGGAC
GACCTCATCA AGCTGGTGAA GGACTCCGGG CTGCGGGGGC GCGGCGGCGC CGGCTTCCCC
ACCGGGATGA AGTGGGGCTT CATCCCGCAG GGCGACGGCA GGCCGCACTA CCTCGTCATC
AACGCCGACG AGGGGGAGCC GGGCACCTGC AAGGACGCGC CGCTGATGAT GGCGGACCCG
CACTCGCTCA TCGAGGGGAT CATCATCGCG GCCTACGCGG TGCGGGCCGG CCGGGCGTTC
GTCTACCTGC GCGGCGAACT GATCCACGCG GCCCGTCGGC TGCAGGCCGC CGTGGCCGAG
GCCTACCGGG CCGGCTACCT CGGCCGGGAC ATCCTCGGCA GCGGCTTCGA CCTCGACCTC
GTCGTGCACT CCGGCGCGGG CGCCTACATC TGCGGCGAGG AGACAGCCCT GCTCGACTCC
CTGGAGGGCC GTCGCGGCCA GCCGCGGCTG CGCCCGCCGT TCCCCGCGAC GCACGGCCTG
TACGCCTCCC CGACGGTGGT CAACAACGTC GAGACGATCG CGTCGGTGCC GTACATCGTG
AACTACGGCG TGGACTGGTT CCGGTCAATG GGCCGGGAGC GCTCGCCGGG GCCGAAGATC
TACAGCCTGT CCGGGCACGT GACCCGGCCC GGCCAGTACG AGGCCCCGAT GGGCACCACG
CTGCGGGAGC TGCTCGACTT GGCCGGCGGC GTGCGGGGCG GTCACGGGCT CAAGGCGTGG
ACCCCGGGCG GGTCGTCCAC TCCGATGCTG ACCGCCGAGC ACCTCGACGC GCCGCTCGAC
TTCGAGGGCA TGCAGGAGGC CGGGTCGCTG CTTGGCACGG CCGCACTCAT GATCATGGAT
GACACGGTCG ACATGCTCAA GGTCGTCCGC CGGCTCACCC AGTTCTACGC GCACGAGTCG
TGCGGCAAGT GCACTCCGTG CCGCGAGGGC ACCACCTGGA TGGTGCAGAT CCTGTCCCGG
ATGGAACGGG GCCAAGGCGA CGCCGAGGAC GTGGACACCC TCGTCGACGC CTGCGACAAC
ATCTTCGGCC GGGCATTCTG CGCGCTGGCC GACGGGGCCA CCTCCCCGAT CGTCTCGGGG
ATCAAGTACT TCCGGGACGA GTTCATCCCG GTGAGTGCGG TGACCACGAA GCCGAACCCC
ACCCCGGGAG ACGCCACGGC CGGCGACGGC TCGCCCGCGT CCGCCCCGGG TGCCTACGCG
GGAGCGCACT GA
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| Protein sequence | MPVTPVLTRR WNTPESWTIE TYTRLDGYTA LRTAFAMAPD DLIKLVKDSG LRGRGGAGFP
TGMKWGFIPQ GDGRPHYLVI NADEGEPGTC KDAPLMMADP HSLIEGIIIA AYAVRAGRAF
VYLRGELIHA ARRLQAAVAE AYRAGYLGRD ILGSGFDLDL VVHSGAGAYI CGEETALLDS
LEGRRGQPRL RPPFPATHGL YASPTVVNNV ETIASVPYIV NYGVDWFRSM GRERSPGPKI
YSLSGHVTRP GQYEAPMGTT LRELLDLAGG VRGGHGLKAW TPGGSSTPML TAEHLDAPLD
FEGMQEAGSL LGTAALMIMD DTVDMLKVVR RLTQFYAHES CGKCTPCREG TTWMVQILSR
MERGQGDAED VDTLVDACDN IFGRAFCALA DGATSPIVSG IKYFRDEFIP VSAVTTKPNP
TPGDATAGDG SPASAPGAYA GAH
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