Gene Francci3_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0538 
Symbol 
ID3905449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp624993 
End bp625355 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content63% 
IMG OID637877867 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_479651 
Protein GI86739251 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGA ACTATGTGCC GATCCTCGTT CTGCTCGTGA TCGCGGCCCT GTTCGCGGTC 
GGTTCGGTCG CGGCCGGTGC GCTGATCGGC CCGCGCCGGT TCAACCGTGC GAAGATCGAC
GCATACGAGT GCGGGATCGA ACCCTCCCCG GCCCCGGCCG GACCGCAGCG TTTCCCGGTG
AAGTACTACA ACACCGCGAT GCTCTTCATC GTCTTCGACA TCGAGATTAT CTTCCTCTTC
CCCTGGGCGG TCGCCTTCGA CAGTCTGGCG GTATTCGGTC TCGGCGCGAT GGCGTTGTTC
ATGGCGACCA TTTTCGTCGC GTACGCCTAC GAGTGGCGGC GTGGAGGTCT GGAATGGGAC
TAG
 
Protein sequence
MLSNYVPILV LLVIAALFAV GSVAAGALIG PRRFNRAKID AYECGIEPSP APAGPQRFPV 
KYYNTAMLFI VFDIEIIFLF PWAVAFDSLA VFGLGAMALF MATIFVAYAY EWRRGGLEWD