| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0537 |
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| Symbol | |
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| ID | 3905448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 623570 |
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| End bp | 624874 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877866 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_479650 |
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| Protein GI | 86739250 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.118976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA CAAGGGCTGA TGGTGCGGCC GGCCGGTCGA AGGCCGACGC CGACGTCATC
GTGGTCGGCG CGGGTCCGGG TGGCTCCTCG GCCGCCTACC ATCTCGCCAG CGCCGGGCTC
GACGTGCTCC TGCTGGAGAA GACGACCTTC CCCCGCGAGA AGGTCTGTGG CGACGGGCTG
ACCCCGCGGG CCGTCCGCAG CCTCGTGGAC ATGGGTGTCG ACACCTCGCC CGTGGCCGGA
TGGGCCCGTA ACCGGGGGCT TCGCATCATT GGCGGCGGCG TCCGCCTGGA GTTGCCCTGG
CCGGAGCTGG CGAGCTGGCC CGACTACGGC CTGGTCCGTC CGCGGCTTGA CTTCGACGAT
CTGCTGGCCC GCCACGCGGT GAAGGTTGGT GCCCGGCTGC ACGAGGGGAC CGCCGTGACC
GGTCCGCTGC TCGACGAGCG CACCGGACGG GTCGTCGGCG TGCACGCCAG GACCGGCACT
GACCGGGCAC CTGTGACGTT CCGGGCGCCA TTGGTCGTCG CGGCGGACGG TAACAGCGCC
CGCATCGCGC TCGCCCTCGG TATCCGCCGC CGGGAGGACC GGCCGCTCGG GGTCGCGGTC
CGCCGCTACT ACCGCAGCCC CCGCACGCAC GACGACTTCC TCGAGTCCCA TCTGGAACTG
TGGGAGGGCA GGCCGCGCGA GAGCCGACTG CTGCCCGGCT ACGGCTGGAT CTTCGGGGTC
GGTAACGGCA CGAGCAACGT GGGCCTCGGC CTGCTGAACA CCACGGACGC CTTCCAGAAC
ACCGACTACC GGGACCTGTT GCGCCGCTGG CTCGCCGCAT TGCCGCCGGA GTGGGGATAC
ACCGAGGACA ACGCCATCGG CCCGGTGCGT GGCAGCGCCC TGCCGATGGG CTTCAACCGG
ACCCCCCATT ACCGCGACGG CGTGCTGCTG GTCGGTGACG CGGGCGGGAT GGTGAATCCC
TTCAACGGCG AGGGCATCGC CTACGCGCTC GAATCCGGTC GGTACGCCGC CGAGATCGCC
GTGCAGGCCC TCGCCCGCCC GGATGGTCCG GCGCGGGAGC GGGCACTCGG CCAGTACCCG
GAACTCATGC GGGCCCGGTA CGGGGGCTAT TACACCCTGG GCCGGTTCTT CGTCCAGCTC
ATCGGCAATC CGACGATTAT GGCGTTCGGT ACCCGCTACG GGTTGCCGAG ACCGGTCCTC
ATGCGTTTCG TTCTCAAGAT CATGGCAAAT CTCACCGACC CCCGGGGAGG GGATGCGATG
GACCGGCTGA TCAACGCGAT GACCCGGCTC GCTCCCGCGG CCTGA
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| Protein sequence | MATTRADGAA GRSKADADVI VVGAGPGGSS AAYHLASAGL DVLLLEKTTF PREKVCGDGL
TPRAVRSLVD MGVDTSPVAG WARNRGLRII GGGVRLELPW PELASWPDYG LVRPRLDFDD
LLARHAVKVG ARLHEGTAVT GPLLDERTGR VVGVHARTGT DRAPVTFRAP LVVAADGNSA
RIALALGIRR REDRPLGVAV RRYYRSPRTH DDFLESHLEL WEGRPRESRL LPGYGWIFGV
GNGTSNVGLG LLNTTDAFQN TDYRDLLRRW LAALPPEWGY TEDNAIGPVR GSALPMGFNR
TPHYRDGVLL VGDAGGMVNP FNGEGIAYAL ESGRYAAEIA VQALARPDGP ARERALGQYP
ELMRARYGGY YTLGRFFVQL IGNPTIMAFG TRYGLPRPVL MRFVLKIMAN LTDPRGGDAM
DRLINAMTRL APAA
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