Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0466 |
Symbol | |
ID | 3903197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 545444 |
End bp | 546793 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877797 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_479581 |
Protein GI | 86739181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.924549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.198291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGG ATAACGCTCA TGCCTGCACT CATCCGCTTG CGTTCATCCG AGCCCAGCGC GGGTGGTCCT ACCAGCGTCT GGCGCGGGTC GTGGCCCGCC GCGCACGTGA CCTCGGGGTG GCGAACATGG CCGCCGAGCG GCAGAAGGTC TGGCGCTGGG AGCACCGTGG GGTCGTGCCC GACCGGGTGT CCCAGCTCGC GCTCGCCGCG GAGCTCGGCG TGCCCAACGA TCGCCTGGAG TCGCACCCCT GGCCCGCGTG GCTACCGACC GGCGACGCGG TGCGCACCGA GTACCCGTGG ACGCCGGGTG GCAGCATAAC CTCGATCATG GACGTCGTCG AGGACGCGCT CTCCGACCGC CGCGGCTTCC TGACGATCAC TGGGACCGGG GTGGCGGAAC TCGCGACGCA GTGGCTCGGC ATGGAACCGG CCCGGCTGGC GGCGGCCCTG AACGGGGGAC GGGTCGACGA CCAGATCGTG AACCGGATCG AGCACAACAT CCCCGGGCTA CGGGTCATGG ATGAGCGGCT CGGTGGGGAG AGCGTGCGCC GGCTGGTCGA CGCCGAGCTC GGCGTGGTGG CGGACCTGCT GGCGCGCGGA TCCTATACCG AGCACGTGGG CCGTCACCTG CATCTGGTGG CCGCGGAGCT CGCCCGGTTC GCGGGATGGG TCTCGTTCGA CGCCGGCTTC CAGACGGCCG CCCAGCGGTA CTGGATCACC GCGCTGCATG CCGCGCACGC CGGCGGGGAC CGCATGCTCG GTGCGAACGT GCTGAAGAAC ATGTCCCTGC AATGCGTGGA CTTCGCCCGC CCACGGGAGG CGGTGGATCT GGCCGAGGCC GCCGTGGCCA GCGCCGGGGG GGCGTCCGGT CGCGTCGGCG CCATGCTGCA CATGCGGCGG GCCCGTGCCC ATGCCGCGCT CGGGGAGGCC AGCGCCTGCG CGCAGGCGCT GGCCTGCTCG GAGGAAGCGA TGGTCACCGC GCGGCCTGAG GAGCCCGCCT GGTCGTCCTA CTTCGACGAG GCCGAGTACC AGGCGCAGAT CGGCAGCTGC TACATCGATC TCGGTCACCT CGCGCAGGCG GACCGGTGGC TGGAACGCTC CCTGGCGATC CAGCCGGACT CCCGGGCCCG GGACCGGGCC ACCTACCTGC TTCGGTGGGC CGCGGTCCAG ATGGATCTCG GTAACGTCGA TCACGGGTGC GAGCTGACCC GCCAGGCCCT GCCGATGCTG GCGGCGACGC GATCCAAGCG CAACGCCCGC CGGGCCGACG AGCTGCGCCG CCGGCTGCGG CGGCACGGCA CCGACCCGGC GGTGCGGGAA CTCGATCAGA TCCTCGCCCG GACTGTCTGA
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Protein sequence | MLTDNAHACT HPLAFIRAQR GWSYQRLARV VARRARDLGV ANMAAERQKV WRWEHRGVVP DRVSQLALAA ELGVPNDRLE SHPWPAWLPT GDAVRTEYPW TPGGSITSIM DVVEDALSDR RGFLTITGTG VAELATQWLG MEPARLAAAL NGGRVDDQIV NRIEHNIPGL RVMDERLGGE SVRRLVDAEL GVVADLLARG SYTEHVGRHL HLVAAELARF AGWVSFDAGF QTAAQRYWIT ALHAAHAGGD RMLGANVLKN MSLQCVDFAR PREAVDLAEA AVASAGGASG RVGAMLHMRR ARAHAALGEA SACAQALACS EEAMVTARPE EPAWSSYFDE AEYQAQIGSC YIDLGHLAQA DRWLERSLAI QPDSRARDRA TYLLRWAAVQ MDLGNVDHGC ELTRQALPML AATRSKRNAR RADELRRRLR RHGTDPAVRE LDQILARTV
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