Gene Francci3_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0458 
Symbol 
ID3903264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp536175 
End bp537128 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID637877789 
Productaldo/keto reductase 
Protein accessionYP_479573 
Protein GI86739173 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.445342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATC GCCCGCTGGG ATCCTCCGGA CTACTGGTGT CTGTCGTCGG CCTCGGCTGC 
AACAATTTCG GCTCGCGCGT CGACCTCACC GGCACCCGTG CGGTCGTCGA CGCGGCGCTC
GACGCCGGGA TCACGTTCTT CGACACCGCC GACACCTACG GGAACAAGGG CGGCTCGGAG
ACGCTTCTCG GGCACGTGCT GCGAGGCCGC CGCGACGATG TCGTCCTCGC CACAAAATTC
GGCAACGACA TGGGCGGCAT GTACGGCCAG GACTTCAGCG CGCGGGCGTC CCGGCGGTAC
ATCCGCAAGG CGGTCGAGGG TTCGCTGAGC CGGCTGCAGA CCGACTACAT CGACCTCTAC
CAGCTGCACA CCCTGGACGC CTTCACGCCG ATCGAGGAGA CGCTCGAGGC CCTCGATGAG
ATCGTCAAGG AGGGCAAGGT CCGTTACATC GGTGCCTGCA ACCTCGATGC CTGGCAGGTC
GCCGACGCGG AGTGGACCGC CCGGGCATCC GGGACGACCC GCTTCATCTC CGCGCAGAAC
CACTACAACC TGCTGGAACG GGGCGTGGAG GCAGAGCTCG TGCCGGCCGC CCAGAAGTAC
GGCATCGGCG TCATCCCGTA CTACCCGCTG GCGAACGGCC TGCTCACCGG CAAGTACCAG
CGCGACGAGG TGCCGGCACC CGGCACCCGG CTGGCCGGCC GGCAGGACGA GCTGACCGAC
GAGGTCTTCG ACCGGCTGGA CGCCCTGGAA ACCTTTGCGC GGGAGCGGGA CCGGTCACTG
CTGGACGTCA CGATCGGCGG GCTGGCCGCC CAGCCCGGGG TCGCCTCGGT CATCGCCGGC
GCGACCAGCC CGGTCCAGGT GCGCGCCAAT GCCGTGGCCG GTCAGTGGCA GCCCCGCGCG
GACGACCTCG CGGTGCTCGA CAAGATCGCC GTGACCCGCC GTCCCGCCGA CTGA
 
Protein sequence
MRYRPLGSSG LLVSVVGLGC NNFGSRVDLT GTRAVVDAAL DAGITFFDTA DTYGNKGGSE 
TLLGHVLRGR RDDVVLATKF GNDMGGMYGQ DFSARASRRY IRKAVEGSLS RLQTDYIDLY
QLHTLDAFTP IEETLEALDE IVKEGKVRYI GACNLDAWQV ADAEWTARAS GTTRFISAQN
HYNLLERGVE AELVPAAQKY GIGVIPYYPL ANGLLTGKYQ RDEVPAPGTR LAGRQDELTD
EVFDRLDALE TFARERDRSL LDVTIGGLAA QPGVASVIAG ATSPVQVRAN AVAGQWQPRA
DDLAVLDKIA VTRRPAD