Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0351 |
Symbol | |
ID | 3905196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 411299 |
End bp | 412174 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877680 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_479467 |
Protein GI | 86739067 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG ACCCGGATCT TCGGATGAGC ACCGCTCTCA TCACCGGCGC ATCCTCGGGC ATCGGCGCGG CGTTCGCCGA GGCATACGCG GACCGTGGAG CCCGGCTCGT CCTCGTGGCG CCGTCCGAGC CGAGGCTGTG GATGGTCGCG GAGCGCCTCG GCGCCCGGTA CGGCACCGAG GCGCACGTCA TCGCGGTCGA CCTCGCCGAC GAGCGTGGTC CGGACCGCCT CGCCGAGGCG GTCGCCGAAG CGGGCCTGGA GGTCGACATC CTCGTCAACA ACGCCGGGTT CGGGACACGC GGTCCCTACC ACGAGCTGTC CGCCGACCGG GATCACCGTG AGGTGATGCT GAACGTGGTG GCTGTCGAAC GGGTCGCGCA CCTGTTCCTG CCGGGCATGG TGGCCCGGGG CCGCGGCACG GTCATCAACG TCTCCTCCAC CTCGGGTTTC CAGGCCGTCC CGTACATGAC CGTCTACGGG GCCTCGAAGG CCTTCGTCCT GTCGTTCTCG ATCGGCCTGT GGGCCGAGTA CCGCCGGCGG GGGGTGCGCG TCCTCGCGTT ATGCCCCGGA CCGACCGACA CCGAGTTCTT CGAGGTGCTG GGAACCCGGA TGTCCGCCGG TGGCCGGTTG CGGACCACGG ACGAGGTGAT CGCCACCGCG TTCCGTGCCC TCGACCGCGG CCAGCCGTAC GTCATCGACG GACGGCTGAA CTACCTGACC TCCAACGCCT CCCGGCTGCT GCCGCGCGGA CTGGTCGCGC GGATCACCGA ACGGGTACTG CGCCCCGGCC GCTCGCGGCC GCCGGACCCG TCGATGTCAG TCCGCCGAGT TCGGCCACCA GCTCGTAGGA GCGGATCCGG TCCGCCAGCC GGGTGA
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Protein sequence | MTADPDLRMS TALITGASSG IGAAFAEAYA DRGARLVLVA PSEPRLWMVA ERLGARYGTE AHVIAVDLAD ERGPDRLAEA VAEAGLEVDI LVNNAGFGTR GPYHELSADR DHREVMLNVV AVERVAHLFL PGMVARGRGT VINVSSTSGF QAVPYMTVYG ASKAFVLSFS IGLWAEYRRR GVRVLALCPG PTDTEFFEVL GTRMSAGGRL RTTDEVIATA FRALDRGQPY VIDGRLNYLT SNASRLLPRG LVARITERVL RPGRSRPPDP SMSVRRVRPP ARRSGSGPPA G
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