Gene Francci3_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0321 
Symbol 
ID3903353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp375329 
End bp376549 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content68% 
IMG OID637877650 
Producttwo component transcriptional regulator 
Protein accessionYP_479437 
Protein GI86739037 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGTA CCACCCGGCG CACGATACGG GGACGGTTAC CGCGGACGGC GGACCGAGGA 
CGACTGTGGC GAGCCATGCT GTGCACCTAC CCAGTTTGCG CAGGTGAACC CCCTGAAGGG
GGATACTCCG ACGGTCAACC CGACGACAGA TCACATCGTG ATCTCGTTGA GATTCACCCA
TCCCTCACTA CTCTCGCCCT CATTGGTCTC ACCAAGATAA AATCTTGGCA AAATGTGGTG
CAATACTTGA TCGAGCGTGG TGTCCATCCC ATCCAAGCCG TCGGGCCCGC CACCCCGGGA
GAGGCTGCCA TTCGAGGGGG TCCCGGTCGT CTCGTCGATG GACATCGCGG CGAGTGGCAC
GCCTACGATT CCGCGGCCCC GCCGGGCATT CACAGACCCG GCATTCACAG CAGGCTCACA
GCAAGACCTC AGGTAACAGC CAGCCAAGGA GGCGAAGCTG ACACCATGCA ACCGGTGCGG
GTCCTCGTGG TGGACGACGA GACAACACTG GCGGAGCTGC TGTCGATGGC GCTGCGCTAC
GAGGGGTGGG AAGTGCGCAG CGCCGCGGAT GGTCGCGGAG CGCTGCGGCT CGCCCGCGAC
TTCCGGCCGG ACGCGGTGGT TCTCGATATC ATGCTGCCCG ACATGGACGG CTTGGAGGTG
CTTCGGCGCC TGCGGGCGGA GAGCCCGGAC GTACCGGTGC TGTTTCTGAC CGCCCGGGAC
GCCGTCGAGG ACCGGGTGGC GGGGCTCACC GCCGGCGGCG ACGACTACGT CACGAAGCCG
TTCAGTCTCG AGGAGCTCGT CGCGCGGCTG CGCGGACTGA TGCGCCGCGC CGCGCGCACC
ACCGAGGCGT TGCAGGGCGC CCGGCTCGTC GTCGGCGATC TCACGATGGA CGAGGAGAGC
CGGGAGGTGC AGCGCGCCGG CCAGCCGGTG CACCTCACCG CCACCGAGTT CGAGCTGCTG
CGCTTCTTCA TGCGCAACCC ACGCCGGGTG CTCAGCAAGG CCCAGATCCT CGACCGGGTC
TGGAACTACG ACTTCGGCGG CCAGGCGAAC GTCGTCGAGC TCTACGTCTC GTACCTGCGC
AAGAAGATCG ACGCCGGCCG CCCCCCGATG ATCCACACGA TGCGCGGGGC CGGGTACGTC
CTGCGGCCGG CCGATCCGGC GCTGGCACCG AGGACCTCCG CCACCCCGTC ATCGAGGGGC
ACCTCGCCGG GCCCGGCATG A
 
Protein sequence
MGSTTRRTIR GRLPRTADRG RLWRAMLCTY PVCAGEPPEG GYSDGQPDDR SHRDLVEIHP 
SLTTLALIGL TKIKSWQNVV QYLIERGVHP IQAVGPATPG EAAIRGGPGR LVDGHRGEWH
AYDSAAPPGI HRPGIHSRLT ARPQVTASQG GEADTMQPVR VLVVDDETTL AELLSMALRY
EGWEVRSAAD GRGALRLARD FRPDAVVLDI MLPDMDGLEV LRRLRAESPD VPVLFLTARD
AVEDRVAGLT AGGDDYVTKP FSLEELVARL RGLMRRAART TEALQGARLV VGDLTMDEES
REVQRAGQPV HLTATEFELL RFFMRNPRRV LSKAQILDRV WNYDFGGQAN VVELYVSYLR
KKIDAGRPPM IHTMRGAGYV LRPADPALAP RTSATPSSRG TSPGPA