Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0321 |
Symbol | |
ID | 3903353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 375329 |
End bp | 376549 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877650 |
Product | two component transcriptional regulator |
Protein accession | YP_479437 |
Protein GI | 86739037 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCAGTA CCACCCGGCG CACGATACGG GGACGGTTAC CGCGGACGGC GGACCGAGGA CGACTGTGGC GAGCCATGCT GTGCACCTAC CCAGTTTGCG CAGGTGAACC CCCTGAAGGG GGATACTCCG ACGGTCAACC CGACGACAGA TCACATCGTG ATCTCGTTGA GATTCACCCA TCCCTCACTA CTCTCGCCCT CATTGGTCTC ACCAAGATAA AATCTTGGCA AAATGTGGTG CAATACTTGA TCGAGCGTGG TGTCCATCCC ATCCAAGCCG TCGGGCCCGC CACCCCGGGA GAGGCTGCCA TTCGAGGGGG TCCCGGTCGT CTCGTCGATG GACATCGCGG CGAGTGGCAC GCCTACGATT CCGCGGCCCC GCCGGGCATT CACAGACCCG GCATTCACAG CAGGCTCACA GCAAGACCTC AGGTAACAGC CAGCCAAGGA GGCGAAGCTG ACACCATGCA ACCGGTGCGG GTCCTCGTGG TGGACGACGA GACAACACTG GCGGAGCTGC TGTCGATGGC GCTGCGCTAC GAGGGGTGGG AAGTGCGCAG CGCCGCGGAT GGTCGCGGAG CGCTGCGGCT CGCCCGCGAC TTCCGGCCGG ACGCGGTGGT TCTCGATATC ATGCTGCCCG ACATGGACGG CTTGGAGGTG CTTCGGCGCC TGCGGGCGGA GAGCCCGGAC GTACCGGTGC TGTTTCTGAC CGCCCGGGAC GCCGTCGAGG ACCGGGTGGC GGGGCTCACC GCCGGCGGCG ACGACTACGT CACGAAGCCG TTCAGTCTCG AGGAGCTCGT CGCGCGGCTG CGCGGACTGA TGCGCCGCGC CGCGCGCACC ACCGAGGCGT TGCAGGGCGC CCGGCTCGTC GTCGGCGATC TCACGATGGA CGAGGAGAGC CGGGAGGTGC AGCGCGCCGG CCAGCCGGTG CACCTCACCG CCACCGAGTT CGAGCTGCTG CGCTTCTTCA TGCGCAACCC ACGCCGGGTG CTCAGCAAGG CCCAGATCCT CGACCGGGTC TGGAACTACG ACTTCGGCGG CCAGGCGAAC GTCGTCGAGC TCTACGTCTC GTACCTGCGC AAGAAGATCG ACGCCGGCCG CCCCCCGATG ATCCACACGA TGCGCGGGGC CGGGTACGTC CTGCGGCCGG CCGATCCGGC GCTGGCACCG AGGACCTCCG CCACCCCGTC ATCGAGGGGC ACCTCGCCGG GCCCGGCATG A
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Protein sequence | MGSTTRRTIR GRLPRTADRG RLWRAMLCTY PVCAGEPPEG GYSDGQPDDR SHRDLVEIHP SLTTLALIGL TKIKSWQNVV QYLIERGVHP IQAVGPATPG EAAIRGGPGR LVDGHRGEWH AYDSAAPPGI HRPGIHSRLT ARPQVTASQG GEADTMQPVR VLVVDDETTL AELLSMALRY EGWEVRSAAD GRGALRLARD FRPDAVVLDI MLPDMDGLEV LRRLRAESPD VPVLFLTARD AVEDRVAGLT AGGDDYVTKP FSLEELVARL RGLMRRAART TEALQGARLV VGDLTMDEES REVQRAGQPV HLTATEFELL RFFMRNPRRV LSKAQILDRV WNYDFGGQAN VVELYVSYLR KKIDAGRPPM IHTMRGAGYV LRPADPALAP RTSATPSSRG TSPGPA
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