| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0276 |
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| Symbol | |
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| ID | 3905718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 317381 |
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| End bp | 320365 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877604 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_479392 |
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| Protein GI | 86738992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.741402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGAG TCTTCGTCAG CCATGCGGGC TCCGACGCGG AGCTGGCCGA CAGAGTGCAT
CAGACGCTGA CCCTTCTTGG CCACCGGGTG TTCCTCGCTC AGAACATCCG GGTGGGCGTC
CAGCCCGGCG ACATGTGGAA GGATCGGTTG CACCGCGAGC TGCGAGCCGC CGACGCCGTG
GTCTGTGTCA TCACCAACGC CTACAACGCC TCCCCGTGGT GCGCCTACGA ACTGGGAATC
GCCTACGAGG TCGGCAGCCT GCTGCTGCCG CTGCGCGTGG AGCCGACGGT CACCTCCCCG
CTTCTGGAGG ACCGGCAGCA CGTTCACCTG CACGAGAATC CGGGGTGGGC CGACAACCTG
AACATTGGGC TGCGGCGCGT CGAGGCCGGC GGCGGGCTGG GCTGGGCGGA CGACCGGTCC
CCGTTCCCGG GTCTGCGGCC GTTCACCCGG GACATGGCCA AGGTGTTCTA CGGGCGCGGC
AACGAGCTGC GGCGACTCAC CCACCGGCTA CGCTCCCTCG GTGAACAGCG TCTGCTACTG
GTGGTCGGCG CCTCCGGATG CGGCAAGTCG TCGCTGGTCA CCGCCGGCCT GCCGGCCCAG
CTGGCGGGCG AGCCCGGCTG GGAGGTGGCC GACCCCTTCT GGCCGGGCCG GGACCCGGTC
CGCAAGCTCG CCCACACCCT GACCCAGGCT GCGAGGCGTG TCGGCCAGCA GTGGGCGGTC
ACCGACATCG ACCGGCAGCT CAGGGAGGAC GACCTGGCCC TGATGGGGCT GGCCGAGGAA
CTTCTGACGG CCGGCTCCGG CCCGGTGCGG GACAGCCTGC TGCTACTGAT CATCGATCAG
GGCGAGGAGC TGTTCACCCG ATCGGACGAA GAGGAACGGG CCCGGTTGGC GACCCTGTTG
CGGCATGGGG TCACCGGTCC CGTGCGGGTG GTCATGGCGC TTCGCTCCGA GTTCCAGGAC
CAGGTCTTCG CCCTGCCCGA ACTGAGCGGC CCCCCCGAAC AGGGCGGGGT CAACCTGCAC
GTCTTCCCCC TCCGCCCGCT GGCCCGGGAC ATGCTGCCGG TCGTCATCAC CGAGCCGGCC
CGGGTAGCCG GCCTGCACGT GGAGCCGGAG CTGGTCGCCA GGATGGTCGC GGACACCGAG
GACGGCGAGG CGCTGCCGCT GCTGGCGTTC ACGCTCCATG AGCTGGCCAA GGACCAGACC
CGCGGCGGCA CCCTGTCGAT GGACCGGTAC CACGAGCTGG GTGGCGTGCG GGGGGCGCTG
GCCCGCCGCG CCGACGCCGT CCTCGACGAC GCCGTGGAGA CGAGCGGGCT GGGCCGGGAG
GAGATCCTGG TCGGCATGGC CGAGCTCGCC ACGCTCGACG AGGCCGGTCG GCGGACCCGC
CGACGCATCG ACCTCAAGGA CCTGCCGTCC GACGCGTTGC GGAGAACCTT CCAGGTCTTC
GTGAACCAAT GGCTGCTGTC CACCCCCAGC GACAGCCTGG GGACCGCCGT CGGGGTCGTC
CACGAGGCGT TGCTGACCGC CTGGAAGCCA CTGGATGCCG TCATCCGGGA ACGGGAAGCC
GCCCTGCTCA GTGAGGGCAA GGTCGAGCGC GCCGCCGCCG AGTGGGAGCA CAACGACGGC
CCGCTCTGGG ACGAGGACCG GCTGACCACC GCCATCACGA CGCTGTGGCA GTCCTATGAG
CGTTTCCGCG CCGGTGAGGA GCCGGTGGTC CATCTCAAAC CGGCCGGGCG GAGGTTCATT
GACGCGTGCG ACCAGCGGAT CGAGGAAGCC CGTCGCCAGG AACGTACGCG CGTCGAGGCG
GCCCGCCGCC GGGAACGTCA CGAACGTCAA CGCCGCCAGC AGGTCATCGC TGTCCTTTCC
GTGCTCCTCG TCTTCACCGT CGTCGGGGCC GCGGTCGCCA CCTGGCAGTC CCTCACCGCC
CGGCAGGCGC AGCGCACCGC GGAACGGGCG CAGCGCACCA CCGAACGGGC GCGGCACGCC
CTGATCACTC ACACCCTGCT CGCCGACGCC GACGCCGCGC GGGCGACGGA CCAGGTGCGC
GCGTTACGAC TCGCCATCGC CGCCGAGGAC ATCGACCCCG GTACCGGTGG TGCGGCCGGC
GGTAAGGCCG CCAGTGGTGA GGCCGCCAGT GGTGAGGCCG GCGGTAAGGC CGACAGGGGC
GCCGACAGCC GGGCGAACTT GCTGCAAACC CTCGCCGAGG ACCCGAACCC ACTCGCCAGC
CGCGGCGATC CCGTCACCTC GGTGGCGTTT TCCCCGGATG GACGCATCCT GGCCGTCGGC
GGCGCGAACG CAACGGTCGT GCTGTGGGAT GTGACGGAGG GTCAACATCG TCGGATCGAC
CCGCCCCTCA CCGGCCAGCA CAGCGGGATC ACGTCGGTGA CGTTCTCGCC GGACAGCCGG
AACCTCGACG CGACCGGCGT CGACGGGACG GTGCTGCGGT GGGACGTCAC CGACCCAGAC
CGGCCACAAT TGCGGGGGCG TGTGAACGCC GCCGCGGCCC TCCCCACGCC GTGGGATGCG
TTCTCCCCGG ACGGGCGCCT CAGAGCCACC GGCCAGGACG GATCAATCAT GCTGGCGGAT
GTCACCGCCC CGGATCGGCC CCGGCCGCCC AGCATCCTTC TCGCCGACCC CGGACCGGTC
CGGGCCGTGG CCTTCTCCCC GCACGGGCAG GTCCTGGCCG CGGTCGGATC TGGCCGGAGG
GTATGGCTCT GGGATACCAG CGTCACCCCG CCGCGGCAGA TCGGGCAGCC GCTGACCGGG
CACACCCGCT CCGTCCTGTC GCTGGCGTTT TCCCCGGACG GCGGGACGCT GGCCTCCGGC
GGCAACGATG GCACCGTCCG GCTGTGGCGG CTCGCCGCGA TCGACGCGTT CCGCCGCAAC
GGCGTCGTCG AGTACGCCTG CCACGAGGCC CAGGGCGGGC TCGACCGGTC GGCGTGGAGC
TTCCACATTC CCGGCCTGCC CTACCAGGAC ACCTGCGCGG GGTGA
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| Protein sequence | MARVFVSHAG SDAELADRVH QTLTLLGHRV FLAQNIRVGV QPGDMWKDRL HRELRAADAV
VCVITNAYNA SPWCAYELGI AYEVGSLLLP LRVEPTVTSP LLEDRQHVHL HENPGWADNL
NIGLRRVEAG GGLGWADDRS PFPGLRPFTR DMAKVFYGRG NELRRLTHRL RSLGEQRLLL
VVGASGCGKS SLVTAGLPAQ LAGEPGWEVA DPFWPGRDPV RKLAHTLTQA ARRVGQQWAV
TDIDRQLRED DLALMGLAEE LLTAGSGPVR DSLLLLIIDQ GEELFTRSDE EERARLATLL
RHGVTGPVRV VMALRSEFQD QVFALPELSG PPEQGGVNLH VFPLRPLARD MLPVVITEPA
RVAGLHVEPE LVARMVADTE DGEALPLLAF TLHELAKDQT RGGTLSMDRY HELGGVRGAL
ARRADAVLDD AVETSGLGRE EILVGMAELA TLDEAGRRTR RRIDLKDLPS DALRRTFQVF
VNQWLLSTPS DSLGTAVGVV HEALLTAWKP LDAVIREREA ALLSEGKVER AAAEWEHNDG
PLWDEDRLTT AITTLWQSYE RFRAGEEPVV HLKPAGRRFI DACDQRIEEA RRQERTRVEA
ARRRERHERQ RRQQVIAVLS VLLVFTVVGA AVATWQSLTA RQAQRTAERA QRTTERARHA
LITHTLLADA DAARATDQVR ALRLAIAAED IDPGTGGAAG GKAASGEAAS GEAGGKADRG
ADSRANLLQT LAEDPNPLAS RGDPVTSVAF SPDGRILAVG GANATVVLWD VTEGQHRRID
PPLTGQHSGI TSVTFSPDSR NLDATGVDGT VLRWDVTDPD RPQLRGRVNA AAALPTPWDA
FSPDGRLRAT GQDGSIMLAD VTAPDRPRPP SILLADPGPV RAVAFSPHGQ VLAAVGSGRR
VWLWDTSVTP PRQIGQPLTG HTRSVLSLAF SPDGGTLASG GNDGTVRLWR LAAIDAFRRN
GVVEYACHEA QGGLDRSAWS FHIPGLPYQD TCAG
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