Gene Francci3_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0231 
Symbol 
ID3906535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp270934 
End bp272280 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content70% 
IMG OID637877560 
Productoxidoreductase FAD/NAD(P)-binding 
Protein accessionYP_479349 
Protein GI86738949 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.911699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA CGCGGCACCC GGCCCGATGG TCTCCCCACC TCGTGGTGCG TCTCGCCCTG 
GTGGCCTGGG GGATCGCCGT GGTGGCCCTG TGGTGGTTCG ACACCTCCGC GTCCAGCGTC
CACGGCGCCG GGCCCGCCAT GACCGCGGTC GGTCGGGTCT GCGGCCTGCT GGCGGCCTAT
CTGGTGCTCG TGCAACTGCT GCTCATGGCA CGGATACCGG CCTTCGAACG CGCCGTCGGT
CTCGACCGGC TGGCCGCGTG GCACCGCGGC CTGGGCACGA ACGTCATCCT GCTCATCGTC
GTCCACATCC TGCTGACGGT GTGGGGTTAC GGCTTGGCCG GGCATCATCA GCCGCTCGCC
GAGCTCGTCA CGGTGATCAT GACATACCCG GAGATGTGGA AGGCCACCGT CGGCACCCTG
CTGTTCGTGG CCGTCGGGGT CGCGAGTGCC CGGGCGGCCC GGCCGCGCAT CTCGTACGAA
GTCTGGTACG CGCTGCATCT CACCACCTAC CTCGCCGTGT TCCTGGTCTT CTTCCACCAG
ACGGAGACCG GTGGGGACTT CGTCGGTCAC CCGGTTAACC GGCTGCTGTG GACCGCGATG
TACGTCTCCG TCGCCGCCTG TCTCGTCGTC TGGCGCCTGA TCCTGCCGAT CGCGGCCGTG
GCCCGGCACC GGATGACGGT CGATCGGGTG GTGGAGGAGG CACCCGGCGT CGTCTCGGTG
TGGATCCGCG GTCACGACCT GCACCGGCTC GGTGCGCGTC CGGGGCAGTT CCTGCTGTGG
CGGTTCGCCG CCCGCGGGCA TCTCGTGACC GCGCACCCCT ACTCGCTGTC GGCCCCGCCG
ACAGCGCATC AGCTGCGTAT CACGGTCAAG GCCGCCGGCG ACCACTCCCG GGCGGTCGCC
CTGCTGCGAC CGGGCACACC GGTCGTGGCG GAAGGTCCCT TCGGACATTT CACCGCCGCG
CGGGCCCACC GGGGCCGGGC GCTGCTCGTC GGCGGGGGCA GCGGAATCGG ACCGGTTCGG
GCGCTGGCAG AGGATCTTGC CGGTCGTGGC GACGACGTCG TGGTTGTGCA CCGGGTGAGC
CGGCCGAGCG ATCTCGCGCT GGGACGGGAG TTTGAGGCGC TCGCCGAGAG CAGTCGAATG
ATCGTCCACC GGGTGATCGG TTCCCGGCGT GAGCTCGGAT ACGACCCGCT GGAGGCCCGC
TTCCTCGATG CCGCCATCCC GGACGCCGCC GACCGCGACG TCTTCGTCTG TGGCCCTCGT
GGGATGACCA CCACGGTCGT CCGGGCGCTT CGCGGTCTCG GCGTTTCCCG TGACCAGATT
CACACCGAGG AGTTCGATCT CCGTTGA
 
Protein sequence
MSSTRHPARW SPHLVVRLAL VAWGIAVVAL WWFDTSASSV HGAGPAMTAV GRVCGLLAAY 
LVLVQLLLMA RIPAFERAVG LDRLAAWHRG LGTNVILLIV VHILLTVWGY GLAGHHQPLA
ELVTVIMTYP EMWKATVGTL LFVAVGVASA RAARPRISYE VWYALHLTTY LAVFLVFFHQ
TETGGDFVGH PVNRLLWTAM YVSVAACLVV WRLILPIAAV ARHRMTVDRV VEEAPGVVSV
WIRGHDLHRL GARPGQFLLW RFAARGHLVT AHPYSLSAPP TAHQLRITVK AAGDHSRAVA
LLRPGTPVVA EGPFGHFTAA RAHRGRALLV GGGSGIGPVR ALAEDLAGRG DDVVVVHRVS
RPSDLALGRE FEALAESSRM IVHRVIGSRR ELGYDPLEAR FLDAAIPDAA DRDVFVCGPR
GMTTTVVRAL RGLGVSRDQI HTEEFDLR