Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0218 |
Symbol | |
ID | 3905385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 256823 |
End bp | 257818 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877547 |
Product | putative serine/threonine kinase anti-sigma factor |
Protein accession | YP_479336 |
Protein GI | 86738936 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.614577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.286809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACG GGAGCACCCT GGGCTCCATC TGTGGCCCGG TCACCGGTGG AAGTGGGGCC GACGGGATTC GGCACGAGGC TTTCCTGTAT CAGGGCGACG CCGGTTTCCT CAGCGCAACG CGCGATTTCG TGCTCGCCGG ACTCGCGGTC GACGAGGCCG TCCTGGTAGC CGTGACACAG CCGCGGATAC GCCAGTTACG CGCAGCCCTC GGTCGGGCCG CGCAGCGCGT CTCTTTTCTC GATATGGCCG AGCTTGGTCG TAACCCGGCC CGGGTTATTC CGGCCTGGCA GGATTTTCTG GATCTCGGTG TCGAGCGCGG TCGGCTGGTA CGGGGGATCG GCGAGCCGAC ATGGCTGGCC CGGTCCGGCC CGGAGCGGCG GGAATCCATG CTGCACGAGG CGTTGCTCAA CGAGGCGTTC GCCGCGCCGC CGGCGTGGCG GCTGCGGTGC CTCTATGACG TGGGCCAGAT CGGCCCGGCG CTCGTTGACG AGATCTGGCG CACCCATCCC GCGGTGGTGG AGGGCGGGCT GGGCCGGATC AGTTCCCGGT ATCGACCGCC CGGGTCCGCC GTCGCGAGTC CGGGCCCCGA CCCGCTGGCC GAGGCCCTGC CGGACCTCGG CGTTCCCCGC GTCGAGTTCG CCTTCGGCCC GCGCGACTTG GGGCACGTCC GCGCCGAGGT GATCCGGGTC GCCCTGGCCT GGGGCCTGGG CGCCGAGCGG ACCGGCGAGT TCGAGCTGGC CGTGCACGAG GTCGCCACGA ACAGCGTGCA CCACGGCGGG GGCCACGGAG CGGTCCGCCT CTGGACGGAC GACGCCTGCC TGATCTGCGA GGTCCGCGAC GGCGGCCGGC TGTACGACCG GTTGGCCGGA CGCCGCCGCC CGGACCTGTC CCTGGGCGGC GGCCGCGGGC TGTGGCTCGT CAACCAGCTG TGCGATCTCG TCCAGCTCCG GTCGACCCGG GTTGGCACGA CCGTGCGGAT GTACATGTAC GTCTAA
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Protein sequence | MSHGSTLGSI CGPVTGGSGA DGIRHEAFLY QGDAGFLSAT RDFVLAGLAV DEAVLVAVTQ PRIRQLRAAL GRAAQRVSFL DMAELGRNPA RVIPAWQDFL DLGVERGRLV RGIGEPTWLA RSGPERRESM LHEALLNEAF AAPPAWRLRC LYDVGQIGPA LVDEIWRTHP AVVEGGLGRI SSRYRPPGSA VASPGPDPLA EALPDLGVPR VEFAFGPRDL GHVRAEVIRV ALAWGLGAER TGEFELAVHE VATNSVHHGG GHGAVRLWTD DACLICEVRD GGRLYDRLAG RRRPDLSLGG GRGLWLVNQL CDLVQLRSTR VGTTVRMYMY V
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