Gene Francci3_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0218 
Symbol 
ID3905385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp256823 
End bp257818 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content72% 
IMG OID637877547 
Productputative serine/threonine kinase anti-sigma factor 
Protein accessionYP_479336 
Protein GI86738936 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.614577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.286809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACG GGAGCACCCT GGGCTCCATC TGTGGCCCGG TCACCGGTGG AAGTGGGGCC 
GACGGGATTC GGCACGAGGC TTTCCTGTAT CAGGGCGACG CCGGTTTCCT CAGCGCAACG
CGCGATTTCG TGCTCGCCGG ACTCGCGGTC GACGAGGCCG TCCTGGTAGC CGTGACACAG
CCGCGGATAC GCCAGTTACG CGCAGCCCTC GGTCGGGCCG CGCAGCGCGT CTCTTTTCTC
GATATGGCCG AGCTTGGTCG TAACCCGGCC CGGGTTATTC CGGCCTGGCA GGATTTTCTG
GATCTCGGTG TCGAGCGCGG TCGGCTGGTA CGGGGGATCG GCGAGCCGAC ATGGCTGGCC
CGGTCCGGCC CGGAGCGGCG GGAATCCATG CTGCACGAGG CGTTGCTCAA CGAGGCGTTC
GCCGCGCCGC CGGCGTGGCG GCTGCGGTGC CTCTATGACG TGGGCCAGAT CGGCCCGGCG
CTCGTTGACG AGATCTGGCG CACCCATCCC GCGGTGGTGG AGGGCGGGCT GGGCCGGATC
AGTTCCCGGT ATCGACCGCC CGGGTCCGCC GTCGCGAGTC CGGGCCCCGA CCCGCTGGCC
GAGGCCCTGC CGGACCTCGG CGTTCCCCGC GTCGAGTTCG CCTTCGGCCC GCGCGACTTG
GGGCACGTCC GCGCCGAGGT GATCCGGGTC GCCCTGGCCT GGGGCCTGGG CGCCGAGCGG
ACCGGCGAGT TCGAGCTGGC CGTGCACGAG GTCGCCACGA ACAGCGTGCA CCACGGCGGG
GGCCACGGAG CGGTCCGCCT CTGGACGGAC GACGCCTGCC TGATCTGCGA GGTCCGCGAC
GGCGGCCGGC TGTACGACCG GTTGGCCGGA CGCCGCCGCC CGGACCTGTC CCTGGGCGGC
GGCCGCGGGC TGTGGCTCGT CAACCAGCTG TGCGATCTCG TCCAGCTCCG GTCGACCCGG
GTTGGCACGA CCGTGCGGAT GTACATGTAC GTCTAA
 
Protein sequence
MSHGSTLGSI CGPVTGGSGA DGIRHEAFLY QGDAGFLSAT RDFVLAGLAV DEAVLVAVTQ 
PRIRQLRAAL GRAAQRVSFL DMAELGRNPA RVIPAWQDFL DLGVERGRLV RGIGEPTWLA
RSGPERRESM LHEALLNEAF AAPPAWRLRC LYDVGQIGPA LVDEIWRTHP AVVEGGLGRI
SSRYRPPGSA VASPGPDPLA EALPDLGVPR VEFAFGPRDL GHVRAEVIRV ALAWGLGAER
TGEFELAVHE VATNSVHHGG GHGAVRLWTD DACLICEVRD GGRLYDRLAG RRRPDLSLGG
GRGLWLVNQL CDLVQLRSTR VGTTVRMYMY V