Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0198 |
Symbol | |
ID | 3903225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 236038 |
End bp | 237273 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877528 |
Product | hypothetical protein |
Protein accession | YP_479317 |
Protein GI | 86738917 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.146044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.294126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGC TGGAGACGCT GCGCACCGGG TGGGACGCGA TCCGCACGCA CCGGCTGCGC TCCGGGCTGA CTGTGCTGGG CATCCTGATC GGGATCGCCG CGGTGGTGCT CACCGTGGGC CTCGGCGTCG GCACGCAGAA CAAGGTCGGA TCGCAGATCA GTGCCCTGGG CAGCAACCTG CTCATCGTCT CGCCAGGCAG CTCGACGAGC CCCACCACCG GCCTGCGCGG CGGGTTCGGC TCCGCCTCGA CGCTGACCAT GACGGACGCG GCCGCATTGT CGTCACCGGT CTCCACACCG GACATCGTCG GGGTCGCCCC GGTCAAGCAG GGCCAACTGA CGCTGGTGAA CGGGGCCACG AACTGGACGA CGACGGTGGT CGGCACGACT GCGGCCTGGC GCCCGGTGCG CAACCGCACC CTCGCCGAGG GCCGTTTCCT CACCACCACG GACGACGCCC AGTCGGCGGC GGTGACCGTC CTCGCCTCGG ACACCGCCGA GCAGTTGTTC GGCCGACGCG ACCCGGTCGA CCAGAGCGTG ACGATCAACA ACATTCCGTT CACGGTGGTC GGGGTGCTCG ATCCGGCCGG TTCGAACACC ACGAGCAACC TCGACGACCA GGCGGTCGTG CCGCTGTCCA CCGCGGCGAG CCGACTGTTC GGCGGGACGA CCCGCACCTC GGTCTCCTCG ATCTACATCG AGGCACGTTC GTCGTCCACG CTCTCAGCGG CCTATCAGGA GGCGACCGAC CTGCTGCTGA ACCAGCACGG CATCGCCAAC CCGGCCAGCG CCGACTTCAC GATCATCAGC CAGCAGTCGC TGCTGGACAC CGCGACCTCG GTGAGCAAGA CCCTCACCGT GCTGCTGGCC GGCATCGCGG CACTGTCCCT GCTGGTCGGC GGGATCGGCG TGATGAACAT CATGCTGGTC TCGGTGACCG AGCGCACCCG CGAGATCGGG CTGCGCAAGG CGTTGGGCGC ACCACCGGCG GCGATCCGAC GCCAGTTCCT GGCCGAGGCG TCCGTGCTCA GCTTCGCCGG CGGGGTGGTC GGCGCGCTGT TGGGCATCAC CGGCGCCCTG GTGCTGCCGC ACTTCATCGA CAACCCGGTG GCGATCGTGT GGTGGGCGGT GCTCGGCGCG ATCGCCGTGG CCGTCGCCAT CGGTATCGCC TTCGGCGTCT ACCCCGCTAG CCGGGCCGCC CGGCTGGCTC CCATCGACGC ACTCCGCAGC GAGTAG
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Protein sequence | MGWLETLRTG WDAIRTHRLR SGLTVLGILI GIAAVVLTVG LGVGTQNKVG SQISALGSNL LIVSPGSSTS PTTGLRGGFG SASTLTMTDA AALSSPVSTP DIVGVAPVKQ GQLTLVNGAT NWTTTVVGTT AAWRPVRNRT LAEGRFLTTT DDAQSAAVTV LASDTAEQLF GRRDPVDQSV TINNIPFTVV GVLDPAGSNT TSNLDDQAVV PLSTAASRLF GGTTRTSVSS IYIEARSSST LSAAYQEATD LLLNQHGIAN PASADFTIIS QQSLLDTATS VSKTLTVLLA GIAALSLLVG GIGVMNIMLV SVTERTREIG LRKALGAPPA AIRRQFLAEA SVLSFAGGVV GALLGITGAL VLPHFIDNPV AIVWWAVLGA IAVAVAIGIA FGVYPASRAA RLAPIDALRS E
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