Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0192 |
Symbol | |
ID | 3903219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 225565 |
End bp | 227316 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637877523 |
Product | N-6 DNA methylase |
Protein accession | YP_479312 |
Protein GI | 86738912 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.341004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC TCGGTAGTTT CATCTGGTCG ATCGCCGACC AGCTTCGGGG TCCCTACCGC CCCAACCAGT ACGGCAACGT GATCCTCCCG CTCACGATCC TGCGCCGGCT CGACTGCATC CTCGAGCCCG ACCGGGAGAC GGTCCGCGAG CTCGCGCGGA CGTTCGACAA CCCGAACCGG CTGAAGATCG AGGTGAAGAA GGCGACCGGC AGGCCGTTCT ACAACACTTC CAACTACGGA TTCAGCAACC TCCTGGCCGA CGCCGACGGG CTGGCGGACA ACCTGGCCGA CTACCTCGAC CGATTCTCGG CGGACGTCGA CGTGTTCGAG TACTTCGACT TCAAGAAGGA GATCCTCGCG CTGGAGAAGG CGGGGCTCCT GCGCGAGATC ATCACCTCGT TCAAGGCGAT CGATCTGCAC CCCAAGGTGG TGTCGAACGC CGACATGGGC GATGCGTTCG AGTACATCAT CCGCAAGTTC AACGAGGCCG CGAACGAGAC CTCCGGCGAC CACTACACCC CACGCGACGC GATCCGGCTG CTGGTCGACC TGCTCTTCGC CGAGAAGGAG GCCGACCTGT CCGAGGCCGG CATCGTGCGT ACCCTCTACG ACCCGACCGC GGGCACCGGC GGCATGCTCG CCCTGGCCGA GGAGCACCTG CTCGCGCAGA ACCCGGACGC GAACCTGAGC CTGTATGGCC AGGAGTACAA CCCGCAGTCG TACGCGATCT GCAAGTCCGA CCTGCTCGCC AAGGGCCACG ACGCGACCAA CATCGCCTTC GGTAACACGC TCACCGACGA CGCCTTCAAG GGCAGGAAGT TCGACTTCTG CATGTCCAAC CCGCCCTACG GCGTCGACTG GAAGCAGTAC GCCAAGAAGG TCACCGAGGA GCGCGACGAG GCGGGCCCGT ACGGCCGGTT CGCCCCCGGC CTGCCGGCGA CCTCGGACGG GCAGATGCTC TTCCTGCTCC ACCTGGCCCA CAAGATGCGG GCGCCCAAGG ACGGCGGCGG CCGGGTCGGG ATCATCATGA ACGGCTCGCC GCTCTTCAAC GGCGCCGCCG GGTCCGGCCC CTCCGAGATC CGCCGGTGGC TGCTGGAGAA CGACCTGGTC GAGGCGATCG TCGCGCTGCC GACCAACATG TTCTTCAACA CCGGCATCGC CACGTACATC TGGATCCTCG ACAACACCAA GCACCCCGAC GCCAGGGGCC TGGTCCAGAT CATCGACGGC ACCTCGTTCT GGACCAAGAT GCGCAAGAAC CTCGGTTCCA AGGGCCGTGA GATCTCCGAC ACCGACCGCG AGAAGGTCGT CAGCCTGTAC GTCGACTTCC TCGACGCCGA CCCCGACTAC TCCAAGGTGC TGAGCAACGA CGAGTTCGGC TACTGGACCA TCACCGTCGA GCGACCCCTG CTTGGCGAGG ACGGCAAGCC GGTCGTCGAC CGCAAGGGTC AGCGCAAGCC CGACCCGAAG AAGCGCGACA CCGAGAACGT CCCCTTCACC TACGGTGGCT CGACCGCCGG CCGGGCCGGC AAGCTCGACG TCATCAACGC CTACTTCGAC GCCGAGGTGA AGCCGCACGT CCCCGACGCC TGGATCGACT GGGCCAAGGT CAAGACCGGC TACGAGATCC CCTTCACCCG CCACTTCTAC AGGTACGTCC CACCCCGCCC CCTCGCCGAG ATCGACGCCG ACCTGGACAA GCAGATCGCC AAGATCCTCG ACCTCCTGCG GGAGGTCGAG GGTGATCGCT GA
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Protein sequence | MSTLGSFIWS IADQLRGPYR PNQYGNVILP LTILRRLDCI LEPDRETVRE LARTFDNPNR LKIEVKKATG RPFYNTSNYG FSNLLADADG LADNLADYLD RFSADVDVFE YFDFKKEILA LEKAGLLREI ITSFKAIDLH PKVVSNADMG DAFEYIIRKF NEAANETSGD HYTPRDAIRL LVDLLFAEKE ADLSEAGIVR TLYDPTAGTG GMLALAEEHL LAQNPDANLS LYGQEYNPQS YAICKSDLLA KGHDATNIAF GNTLTDDAFK GRKFDFCMSN PPYGVDWKQY AKKVTEERDE AGPYGRFAPG LPATSDGQML FLLHLAHKMR APKDGGGRVG IIMNGSPLFN GAAGSGPSEI RRWLLENDLV EAIVALPTNM FFNTGIATYI WILDNTKHPD ARGLVQIIDG TSFWTKMRKN LGSKGREISD TDREKVVSLY VDFLDADPDY SKVLSNDEFG YWTITVERPL LGEDGKPVVD RKGQRKPDPK KRDTENVPFT YGGSTAGRAG KLDVINAYFD AEVKPHVPDA WIDWAKVKTG YEIPFTRHFY RYVPPRPLAE IDADLDKQIA KILDLLREVE GDR
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