Gene Francci3_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0100 
Symbol 
ID3902933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp122042 
End bp122794 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID637877430 
Producthypothetical protein 
Protein accessionYP_479223 
Protein GI86738823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.371889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGTT TCCGGCCCAG TACCAGCGCG TTCCGGTTCA CGAACAGCTT CGCTCCGCAA 
CCGTTGTTGG CCGTTTCGGC GCCATGGTCG ACTCGGCGGC TGGGCCTCGG CGACGCCAGC
CGGGGCCTGT GCGGCGGGAT GATCTACGCT GTGCGTGATC TGTTCGAGGC CGGAATCGGG
CCGCCGCCTG ACGTCGTGGC GCCGGCAGTC GGTTCCCCGC TGTACGCGTA CCTCGTCCGC
CGCCTGCTGG AGAGCTTCGA CATCCCGCGG GGGGTGGCCC GCTACTACCG GCTCATGCAG
GGCGCCGATG CCGACGTCAA CCGGGGGATC CGGGTCCGGC CGGGAGTCGC GCGGACGAGC
CTGGCGGATG AGTGGCCACG GATCCGGCTC GATCTGGACG AGGGGTTGCT GTCCCCGATC
GGGATCATCA CGGTGCGCTC CCCCGATCCG CGGCTGCTCG GCCTGAACCA TCAGGTGCTC
GCCTACGCCT ACGTCCAGGC CGGAACGTCG ATCACGCTCC GTGTCTATGA TCCGAACACT
CCCGGGGACC GGGCCGACGA GGTCACGCTG AGTTTCGATC TCGCCGGGCC GGCGCGGATC
GAGCACTCGA TCGCGATCGG GGGGCGGCCG GTCCGAGCCT TCTTCCGTTC CCGCTACCGA
TGGGTCGACC CGCGCCGCGC CATCGCGCCC GCGGCAGGCC GCCCCGCGGG GCAGGAGGCG
CCGGGCCGTT CACGCCTGGA GAAGGGCCGG TGA
 
Protein sequence
MPGFRPSTSA FRFTNSFAPQ PLLAVSAPWS TRRLGLGDAS RGLCGGMIYA VRDLFEAGIG 
PPPDVVAPAV GSPLYAYLVR RLLESFDIPR GVARYYRLMQ GADADVNRGI RVRPGVARTS
LADEWPRIRL DLDEGLLSPI GIITVRSPDP RLLGLNHQVL AYAYVQAGTS ITLRVYDPNT
PGDRADEVTL SFDLAGPARI EHSIAIGGRP VRAFFRSRYR WVDPRRAIAP AAGRPAGQEA
PGRSRLEKGR