Gene Francci3_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0078 
Symbol 
ID3905122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp96417 
End bp97085 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID637877408 
Producthypothetical protein 
Protein accessionYP_479201 
Protein GI86738801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTCGAA GAGGGACGGA GGACGGGCGC GACCCCTTTG TCGATCATGG AGTTCTCGAC 
ACTTCATGTT CGACAGGGAA GGGGAATGGG CCCGGGACGC CCGCACCGGG CGGCGTTGGA
AAGAGCTGCC GAAGCCTGGA TCCAGGCTCA CTGGCGGCCC TCGACGCCGC CCCACACCGC
CCGACATGGC GGGCGGGCCG GGTACGGCGC GTGCTCACGG TAGATGGAAC GACGATGCGC
CCCCAGCACG GCAGCCGCCA CGTGCACCTG CCCGAAGGCC TCGCCCACGC CTGCGGCGTG
CTCCTGACAC AGGTCGACGT CGACGAGAAG ACCAACGAAA ATCCCTTTGT TCTCCGCGGT
TTAGGCCAGA TTCCTGACCT GACCGGCGTC CTGATCACTG CTTTCCCGGC CCCGCCCTCA
CACGCCCAGG CGGCAGGATC AAACGGCCAC CAGCTCAACA CACTGGAGCC CGGGGAACCG
TGCCCGCAGA GCCTGGCAGA TCTGCTCCGG CCTCCACCGT ATGGCGAGGT GGTCCTGGAT
GAGGTCCCGC AGCTACGAGT TACGGATGAT CTTGCTGGTG TCCGAGAAAC GGGCCGCACC
TCAGTTCACT CGCGTCAGCA TTTCGTTGTC CGGTGCCGTG GACCAGTAGC ACGGGAACGA
GAACAGTAG
 
Protein sequence
MGRRGTEDGR DPFVDHGVLD TSCSTGKGNG PGTPAPGGVG KSCRSLDPGS LAALDAAPHR 
PTWRAGRVRR VLTVDGTTMR PQHGSRHVHL PEGLAHACGV LLTQVDVDEK TNENPFVLRG
LGQIPDLTGV LITAFPAPPS HAQAAGSNGH QLNTLEPGEP CPQSLADLLR PPPYGEVVLD
EVPQLRVTDD LAGVRETGRT SVHSRQHFVV RCRGPVARER EQ