Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0069 |
Symbol | |
ID | 3905404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 86820 |
End bp | 88559 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877399 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_479192 |
Protein GI | 86738792 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGC GTCTCCCCTT CAGCAGTAGC GCCGAGGCCG CCCCCGGGGG CGGCGGCAGG GAGGGGTCCG GCGCCGGGCA TGACTCCCCC TCCCCCTGGG CTCCGCCCAT CGGCAGCGCG GCCGGGACAC CAGCCGGCCA AGCTCACCCG GCTGGTCCCG CCAGCTCCGA ACCCGACCTC CCGGCGGGCC CGCCTTCCCG TCCGCCCGGC TCGCCGTACA GCCAACCGCC GGCGCTGGGG CCATCCTCCG GCCAGCATCC TCAGTATCCG AATCCCCATC CCCCGCATGG GGATCCTCGT CCGTATCCGG ATTCTCCGTA CCCGGCCGGG CCGTCCCAGG CCAGCCAGCA GCAGGCCGCG TTCTCCGCGG GAAGCCCACC TCCGGCGGCG CCGCCCGGCG GCCCGTGGGG ACCACCTTCA GGCCCGCCAC CCAGTGGTCC CGCTGCCCCG AGAGCTCTGA ACGGCGCGGC CGGCCCCGCG GGCCCCCCCG CGGGACCCCC GACCGGAGGG CATTCCTGGG GACCGCCGTG GAGTTCCCCG AGCGGCGCCG GCTCGCCACC CGCCCAGGAC CTCTACGGCA ACGGGACAAC CATGGCCGCC TCGCCGCCTT GGCGCCGACG GCGGCTCGTC GCCGCCGGAC TCGCCATTGC CCTGGTCTCA GCTGGTGTAG GTGGCGGTGT CGGAGCGCTG GTCGCCGATA ACAACGGGGG GCAGACCATC GTCACATCCG CCGGTCTGCA CAACACCGTG GACAGTTCCG GTGGAACGTC GCCGGCAGCC GCGAACACCG TGTCGGCCGC GGCGCAGAAG ATCCTGCCGA GTGTCGTGAC AATCTCCGAG GAATCGAGCA GCGAGTCGGG CACCGGCTCC GGCACCATCA TCCGTTCGGA CGGGCATATC CTGACGAACA ACCATGTGGT CTCGGGTGCC GCGAACGGCG GTTCGCTGAC GGTCACCCTG CAGGACGGTC GTACCTTCGA TGCGCAGGTC GTAGGCACGG ATCCGAGCTC GGACCTCGCG ATGATCAAAA TCAATGCCAC CGGTCTCACT GCGGCCACGT TCGGCAATTC CGACACGCTG AACATCGGGG AACTGGTGGT AGCGGTCGGC AGTCCGCTCG GGCTGAACGG TACGGTCACG TCCGGCATCG TCAGTGCCGT GCATCGCCCG GTGCGCACCG GGGATTCAAC CGTGCGGGAT CAGCAGAACA CCGTGCTCGA CGCAATCCAG ACCGACGCAT CGATCAACCC CGGTAACTCC GGTGGTCCGC TGGTCAACAG TCGCGGCGAG ATCATCGGCG TGAACAGCGC GATCGCGACC GTGGGTGGTG GAAGTCCCTT CGGTGGCGGC CAGCAGTCCG GCAACATCGG CGTCGGTTTC GCTATTCCGG GCAACTATGC CGAGTCGGTG GCCACCCAGT TGATCTCCAC GGGAAGCGCC CGGCACCCGT ACCTGGGCGT CAGCGCCTCC ACCGCGGAGG AGAACACCCG CTCCACCGCC TCCAGCGGCA ACGGTGCACA GATCCGCTCC ATGGTTCCGG GTGGACCCGC CGAAAGGGCC GGCCTTCGCA CCGGCGACGT CATCACGAAG GTCGGCAACC GTGCCGTCAA CGACGTCGAC TCCCTCATCG CGGCGGTCCG GTCCCACGCC ATCGGCGACG AGGTGGAAGT GACCTATACC CGTGATGGAC AGAGCGGCAC CGTCAAGGCC CGGCTCGCCC AACAACCACC GGCATCCTGA
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Protein sequence | MTPRLPFSSS AEAAPGGGGR EGSGAGHDSP SPWAPPIGSA AGTPAGQAHP AGPASSEPDL PAGPPSRPPG SPYSQPPALG PSSGQHPQYP NPHPPHGDPR PYPDSPYPAG PSQASQQQAA FSAGSPPPAA PPGGPWGPPS GPPPSGPAAP RALNGAAGPA GPPAGPPTGG HSWGPPWSSP SGAGSPPAQD LYGNGTTMAA SPPWRRRRLV AAGLAIALVS AGVGGGVGAL VADNNGGQTI VTSAGLHNTV DSSGGTSPAA ANTVSAAAQK ILPSVVTISE ESSSESGTGS GTIIRSDGHI LTNNHVVSGA ANGGSLTVTL QDGRTFDAQV VGTDPSSDLA MIKINATGLT AATFGNSDTL NIGELVVAVG SPLGLNGTVT SGIVSAVHRP VRTGDSTVRD QQNTVLDAIQ TDASINPGNS GGPLVNSRGE IIGVNSAIAT VGGGSPFGGG QQSGNIGVGF AIPGNYAESV ATQLISTGSA RHPYLGVSAS TAEENTRSTA SSGNGAQIRS MVPGGPAERA GLRTGDVITK VGNRAVNDVD SLIAAVRSHA IGDEVEVTYT RDGQSGTVKA RLAQQPPAS
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