| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0068 |
|---|
| Symbol | |
|---|
| ID | 3905403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 85040 |
|---|
| End bp | 86473 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637877398 |
|---|
| Product | sigma-24 |
|---|
| Protein accession | YP_479191 |
|---|
| Protein GI | 86738791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGAT GCCGGCCCGT TCCGGGGCCG CCGCTAGTCC CCGGGGAGAA GCTGAGTATG
GACGACGACG CGGACCTGGT GGCCCGTGTC CGACGTGGTG ACCGACAGGC GTTCGACGAT
CTCTACGATC TGTACGCCGA TGATGTCTTC TCGATGTGCC TGCTGATTCT GGGCGATCCC
ACCGTGGCCC GCGCAGCGGC CGGGACGGCG TTCGCCCTCG TCGCCCGCAC TCGTCTAAAT
CCTCTGAGCG ATCCCACCCG GCTGCGGTCC TGGCTACTCG AGCTTGCTCG AGGAAGCGCT
CTGGCCTGGT CTGGATCGCC CCAGGCGCGC AGCATCCCGG TACCCCATGG AGTCTCGCCC
GAAGAGCTCC TCGCCGGTGC CGTGGTTCCG GCGCCAGCGA GTCTGCGGGT CGGCCTCGCG
CGCACCTTCG ATCGCGCCGC TGTCGCGGCT GTAGCCGCAG CCTCAGCCGC CAGTCGGCGG
GCAGCGGCAG CGGCAGCGGC AGCGGCAGCC GATACTGAGA GCGAAGTCGG CGAGACCACC
AAGGAGACAC CGAAGGTCAA TCTCGTCAAG GTACCGACGG CTCCACCCAG CGGTGACAGG
TACGCCGACG CCGAGAAAAC CATCATCGCC GCCACCACGC ACTCCGTGCG TGTACTCCCG
CTCATGCGCA TGGACTCCGA CAACGACCTC ACCGACGCAC CGCAGACTCA TGCTGGCCGC
GGCAGCGCGG GATGGCGCAG GCGGTCGGCG GTGGCAGTCG CCGCGGTGAC GGCCATCGCC
GTCGCCGGCC TCACGGCGGC CATGAACTGG CCCACCTCCG ATGCCCAGCT GCTGTCGGAG
GACGAGCCGA ATATCACGCA GGTGACGCAG GGGCAGGTGA CGCAGGCACC GACCCCGGAC
GCGATACGTC CGCCCATGCC TGCGGCCGCA CCCAGCAATG CGGCCGCGAC GTCCTCGACA
GTCGTCCCGA CGGTTGCCGG AGCGTTTACC AGCCGGGCTG CATCGCCCGG AGGCTTGGAA
CCACACCTCA TGGAGCCCAT CGCGCGACAG GTCAGCAAGC CCTCGCCCTC CGCCACCCAC
CGTCCCGACC CTGCTTTTGT CAAGACGCCT GCGACATCGC CTCCGTCCTC GCCATCCACC
GCCCCGGCGC CACGCACGCC GACGACGGAG CCACCGACCA CGACTCCTAC ACAGCCGCCA
ACCACGGCTC CATCGCCAGC CAGCAGACCC ACGACGGCAC CCACCAGCAC CCCACCCTCG
ACGACACCGA CCGGGGTGGA CGCTCCGACG CCGACGTCCC CGCCGAGTGG CAACCCCGGG
AGCCCAAGTA CCGGACCTGC CCCCAGCAGT TTCTCCACCG GAGGGACAAG TTCACCCAGC
ACGGGCGGCT GGATCACCAA TACGATCACA ATACCGCTGC CCATTTTCAT CTAG
|
|---|
| Protein sequence | MGRCRPVPGP PLVPGEKLSM DDDADLVARV RRGDRQAFDD LYDLYADDVF SMCLLILGDP
TVARAAAGTA FALVARTRLN PLSDPTRLRS WLLELARGSA LAWSGSPQAR SIPVPHGVSP
EELLAGAVVP APASLRVGLA RTFDRAAVAA VAAASAASRR AAAAAAAAAA DTESEVGETT
KETPKVNLVK VPTAPPSGDR YADAEKTIIA ATTHSVRVLP LMRMDSDNDL TDAPQTHAGR
GSAGWRRRSA VAVAAVTAIA VAGLTAAMNW PTSDAQLLSE DEPNITQVTQ GQVTQAPTPD
AIRPPMPAAA PSNAAATSST VVPTVAGAFT SRAASPGGLE PHLMEPIARQ VSKPSPSATH
RPDPAFVKTP ATSPPSSPST APAPRTPTTE PPTTTPTQPP TTAPSPASRP TTAPTSTPPS
TTPTGVDAPT PTSPPSGNPG SPSTGPAPSS FSTGGTSSPS TGGWITNTIT IPLPIFI
|
|---|
| |