Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0050 |
Symbol | |
ID | 3903529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 63095 |
End bp | 63721 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877380 |
Product | nitroreductase |
Protein accession | YP_479173 |
Protein GI | 86738773 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCTC TCGCCTGCCT GATGACGCGC CGCACAGCGA CCCGGCTCGT CGAACCCGGT CCGACGGTGG AGCAGATTAT GATCATGCTT GGCGCCGCCA CCACGGCGCC GGATCACAAG ATGCTGCGGC CCTGGCGCTT CGTGGTTGTG CGGAGCGATG CCCGCGCCAC CCTGGCTGCG GCGATCAAGC GGGCCGCCGA GGCCCTCGGC GGGTTGCCCG AGCCGGTCAT CCGCAAGACC GCGGGCAAGG CCACCCGTTC CCCGGCGCTC ATCGCCGTCG TCGCATCCCG TGTCGGTTCG AAGGTTCCGG TCGCCGAGCA GGACGCCTCG GCCGCGGCAG CGGCGCAGAA CATCTGCCTG GCCGCGCACG CGCTCGGCGT CGCCTCGGCC TGGAAGTCGG TGCCGATGCA GGACAGCGCC GAGGTCCGGG GGGCGTTCGG GCTGACGTCG GACGAGGTGC TGGTCGGCTG GGTGGAGCTC GGGACCCAGG CGGACACCGC GCCGCTGCCG GCGCGGCCCG CCGTTCGGCT GGCCCAGGTC GCGACGGAGA TGGAGGTCGA CGGGACGCTG GTTCCCGTGG CGGCGGACGA TCGGATCTCC CAGTTCGGGC AAGTGACCAC GGTGTGA
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Protein sequence | MDALACLMTR RTATRLVEPG PTVEQIMIML GAATTAPDHK MLRPWRFVVV RSDARATLAA AIKRAAEALG GLPEPVIRKT AGKATRSPAL IAVVASRVGS KVPVAEQDAS AAAAAQNICL AAHALGVASA WKSVPMQDSA EVRGAFGLTS DEVLVGWVEL GTQADTAPLP ARPAVRLAQV ATEMEVDGTL VPVAADDRIS QFGQVTTV
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