Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0041 |
Symbol | |
ID | 3903520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 50181 |
End bp | 51176 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877371 |
Product | NLP/P60 |
Protein accession | YP_479164 |
Protein GI | 86738764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.430296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCG GCTTCACCCG TAAGCGTTCC CGCTGGCTGG TCTGGACGGG GGCGGGCATG GCCCTCGCCG TCGGCGGCAT CGTCATGCTG GTCGCCGTCC TCATTCTGAT CATCACCGGT CCCTTCATCC AGGATCAGGG CGGGGGTAAC CGGACCATCA GGAACTCCGA CGGCATCCCG GCCGAGTACC TGCAGACGAT CATTGATGCG GCGAACGCGG CCGGGTGCGC CGAGGTGACT CCCGCCCTGC TGGCCGCCCA GTTACATCAG GAGTCGGGTT TCAACCCGCG GGCCCGGTCA CCCGTGGGCG CGATGGGGAT CGCCCAGTTC ATGCCCGGGA CGTGGGCGTC CCACGGGCAG GGCGACGTGT GGAACCCGGC CGACGCGATC CCCGCGGCGG CCCGGTACGA CTGCGCGGTG GCGGCCTCGG TCGCCTCCGT GTCCGGCGCG GCCCAGGAGA AGATGCTGGC CGCGTACAAC GCGGGAGCGG GCGCGGTGCT CGCCTTCGCC GGCATTCCGC CGTACACCGA GACGCGTAAC TACGTCCGCA CGATCCTCGC GCAGGCGCAG GTGTACGGTG ACGCCTTGGA GCTCGGCGTC GACATCCCCG CTGGTTCGGT CGCCCCGATG GTCGCCTTCA TGCGGTCGCA GATCGGCAAG CCCTACGTCT GGGGTGCGAC CGGTCCCGAC GCCTGGGACT GCTCGTCGCT GGTCCGGGAG GCGTATCGCC GCATCGGCAT CGAGCTCCCC CGCGTGACGA CCGACCAGCT GCGGTTCGGC CCGCAGGTCG CGGGCGTCGA TCCGCAGCCG GGGGACCTAC TGTTCACCCC GGGCACCGAC GGCACCGCCG AGGCGCCGGG TCATGTCGGG ATGTACATCG GCGACGGCCG GGTCATCGCG GCCAAGGGAG CGCGGTGGGG GGTCGTCGAA TCCGACATCT CGGACTGGAG TGGGACCGTG GCCGTGACCA GGCCGCTGGC CAGGCAGCGT TCCTGA
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Protein sequence | MARGFTRKRS RWLVWTGAGM ALAVGGIVML VAVLILIITG PFIQDQGGGN RTIRNSDGIP AEYLQTIIDA ANAAGCAEVT PALLAAQLHQ ESGFNPRARS PVGAMGIAQF MPGTWASHGQ GDVWNPADAI PAAARYDCAV AASVASVSGA AQEKMLAAYN AGAGAVLAFA GIPPYTETRN YVRTILAQAQ VYGDALELGV DIPAGSVAPM VAFMRSQIGK PYVWGATGPD AWDCSSLVRE AYRRIGIELP RVTTDQLRFG PQVAGVDPQP GDLLFTPGTD GTAEAPGHVG MYIGDGRVIA AKGARWGVVE SDISDWSGTV AVTRPLARQR S
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