Gene Francci3_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0041 
Symbol 
ID3903520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp50181 
End bp51176 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID637877371 
ProductNLP/P60 
Protein accessionYP_479164 
Protein GI86738764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.430296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG GCTTCACCCG TAAGCGTTCC CGCTGGCTGG TCTGGACGGG GGCGGGCATG 
GCCCTCGCCG TCGGCGGCAT CGTCATGCTG GTCGCCGTCC TCATTCTGAT CATCACCGGT
CCCTTCATCC AGGATCAGGG CGGGGGTAAC CGGACCATCA GGAACTCCGA CGGCATCCCG
GCCGAGTACC TGCAGACGAT CATTGATGCG GCGAACGCGG CCGGGTGCGC CGAGGTGACT
CCCGCCCTGC TGGCCGCCCA GTTACATCAG GAGTCGGGTT TCAACCCGCG GGCCCGGTCA
CCCGTGGGCG CGATGGGGAT CGCCCAGTTC ATGCCCGGGA CGTGGGCGTC CCACGGGCAG
GGCGACGTGT GGAACCCGGC CGACGCGATC CCCGCGGCGG CCCGGTACGA CTGCGCGGTG
GCGGCCTCGG TCGCCTCCGT GTCCGGCGCG GCCCAGGAGA AGATGCTGGC CGCGTACAAC
GCGGGAGCGG GCGCGGTGCT CGCCTTCGCC GGCATTCCGC CGTACACCGA GACGCGTAAC
TACGTCCGCA CGATCCTCGC GCAGGCGCAG GTGTACGGTG ACGCCTTGGA GCTCGGCGTC
GACATCCCCG CTGGTTCGGT CGCCCCGATG GTCGCCTTCA TGCGGTCGCA GATCGGCAAG
CCCTACGTCT GGGGTGCGAC CGGTCCCGAC GCCTGGGACT GCTCGTCGCT GGTCCGGGAG
GCGTATCGCC GCATCGGCAT CGAGCTCCCC CGCGTGACGA CCGACCAGCT GCGGTTCGGC
CCGCAGGTCG CGGGCGTCGA TCCGCAGCCG GGGGACCTAC TGTTCACCCC GGGCACCGAC
GGCACCGCCG AGGCGCCGGG TCATGTCGGG ATGTACATCG GCGACGGCCG GGTCATCGCG
GCCAAGGGAG CGCGGTGGGG GGTCGTCGAA TCCGACATCT CGGACTGGAG TGGGACCGTG
GCCGTGACCA GGCCGCTGGC CAGGCAGCGT TCCTGA
 
Protein sequence
MARGFTRKRS RWLVWTGAGM ALAVGGIVML VAVLILIITG PFIQDQGGGN RTIRNSDGIP 
AEYLQTIIDA ANAAGCAEVT PALLAAQLHQ ESGFNPRARS PVGAMGIAQF MPGTWASHGQ
GDVWNPADAI PAAARYDCAV AASVASVSGA AQEKMLAAYN AGAGAVLAFA GIPPYTETRN
YVRTILAQAQ VYGDALELGV DIPAGSVAPM VAFMRSQIGK PYVWGATGPD AWDCSSLVRE
AYRRIGIELP RVTTDQLRFG PQVAGVDPQP GDLLFTPGTD GTAEAPGHVG MYIGDGRVIA
AKGARWGVVE SDISDWSGTV AVTRPLARQR S