Gene Francci3_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0033 
Symbol 
ID3903608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp39396 
End bp39938 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID637877363 
ProductPBP family phospholipid-binding protein 
Protein accessionYP_479156 
Protein GI86738756 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TCGACCGCGG TACACCCCCC GACCCGTTCG ACGTGCTGCC CGCCAAACCG 
CTGTTCACCG TGACCAGTAC GGACCTCGTC GACGGTGGAG TCGTTCCGTC CGATCAGGTG
CACACCAGCG CCGGGGGCGC CGACATCTCC CCACAGCTGG CCTGGTCCGG TCAGCCCGCC
GAGACCAGGA GCTTCGTCGT CACCTGCTAC GACCCGGACG CGCCCACCGG CAGCGGATTC
TGGCACTGGG TCCTGGTGGA CATCCCCGCG GCGGCGACCG AACTTCCCCG CGGCGCGGGC
AGCGGCGACT TCACCGGCCT GCCCGCCGGC GCGTATCACG TGCGCAGCGA CTGGGGCTCC
AAGGCGTATG GCGGGGCCGC GCCGCCGCAG GGCGACGTAC CGCACCGGTA CATCTTCACC
GTCCACGCGG TCGACGTGCC GAAACTAGAG ATCAACGACG AGGTCTCACC GGCCGTCGTC
GGCTTCAACC TCACCTTCCA CACTCTCGCC CGGGCCGTGC TGCGGGTGAC CTTCCAACGC
TGA
 
Protein sequence
MSLLDRGTPP DPFDVLPAKP LFTVTSTDLV DGGVVPSDQV HTSAGGADIS PQLAWSGQPA 
ETRSFVVTCY DPDAPTGSGF WHWVLVDIPA AATELPRGAG SGDFTGLPAG AYHVRSDWGS
KAYGGAAPPQ GDVPHRYIFT VHAVDVPKLE INDEVSPAVV GFNLTFHTLA RAVLRVTFQR