| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0023 |
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| Symbol | |
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| ID | 3903598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 30875 |
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| End bp | 31867 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877353 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_479146 |
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| Protein GI | 86738746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.408897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTGGC TGTCCAATCC GCAGGACCTG CACCGCGTCG AGGACCGCGT CTCCACGCTC
TACGTCGAGA AATGCCACGT TGACCGCGAC GACAACGCCG TCGTCCTGGT CAACAAGGAA
CGCACCGTCC GTGTCCCCGC CGCGTTCGTC GCCACCGTCC TGCTCGGTCC CGGAACCCGC
ATCACCAGCG CCGCCGTGCG CCTGCTCGCC GACTCCGGCA CCGCCCTGTG CTGGGTCGGC
GACCGCGGCG TACGCATGTA TGCCGCAGGA CTCGGACCCA GCCGCGGCGC CGGCCTGCTC
ATGCGCCAGG CTTACCTCGT CACCCGCACC AGCGAACGCC TTGACGTCGC CCGCCGCATG
TACGCCAAAC GCTTCCCCGA CGACGACGTC ACCACCGCCA CCATGCAACA ACTCCGCGGC
CGGGAAGGCG CCCGCATCAA AAAGATCTAC CGCGATCACG CCACCCGCAC CGGCGTCACC
TGGAACAAAC GCGTCTACAC CCACGGCGAC CCCTTTGCCG ACAGCGACGA CATCAACCGG
CTCCTGTCCG CCGGACACAG CTGCCTCTAC GGCATCTGCC ACGCCGCCAT CGTCGGCATC
GGCGCCAGCC CCGCCCTCGG ATTCGTCCAC ACCGGAGCCG CCACCTCCTT CGTCCTCGAC
ATCGCCGACC TGTACAAAGC CGACTACACC ATTCCCCTCG CCTTCGACCT CGCCGCCGCC
GGCCTCACCG ACGAGCGCGA CATCCGCACC GCCTTCCGCG ACAAAGTCGC TGACGGGCAC
CTCATGGCCC GCATCATCCA CGACATCAAA GACCTCCTCA TCGAGGAAGG AACCCGAGAT
AACGACGAGG ACGCACTCCA CTTGTGGGAC GAGCTCGACG GCCACGTCCC CGGCGGCGTC
AACTGGGCCG CCGACCTCGC CGACCAGACC GACGACACCA CCATCCTCGG TGTCACCGGA
CCCGACACCG ACCAGCCACC CCCACCCTGG TGA
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| Protein sequence | MWWLSNPQDL HRVEDRVSTL YVEKCHVDRD DNAVVLVNKE RTVRVPAAFV ATVLLGPGTR
ITSAAVRLLA DSGTALCWVG DRGVRMYAAG LGPSRGAGLL MRQAYLVTRT SERLDVARRM
YAKRFPDDDV TTATMQQLRG REGARIKKIY RDHATRTGVT WNKRVYTHGD PFADSDDINR
LLSAGHSCLY GICHAAIVGI GASPALGFVH TGAATSFVLD IADLYKADYT IPLAFDLAAA
GLTDERDIRT AFRDKVADGH LMARIIHDIK DLLIEEGTRD NDEDALHLWD ELDGHVPGGV
NWAADLADQT DDTTILGVTG PDTDQPPPPW
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