| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0021 |
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| Symbol | |
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| ID | 3903596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 29208 |
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| End bp | 30038 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637877351 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | YP_479144 |
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| Protein GI | 86738744 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.538245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACCCGCCCCG CCACTGCCTG GTGCTGCGCC TCGCCGGCCC CCTGCAGTCC
TGGGGTTCCC GCAGCATGTT CAACCGCCGC GACACCCTCA CCGAACCGAC GAAGAGCGGG
ATCATCGGGC TGCTCGCCGC CGCCCAGGGC CGCCGGCGCA CCGACCCGAT CGAGGACCTC
CTCAGCCTCA CCCTCGGGAT CCGCACCGAC CAGCCCGGCA CCCTGCTGCG CGACTACCAC
ACCGTCAGCG ACTACCGCGG CCGGCCGCTA CCCTCCGCCG CGGTCAGCGC GAAAGGCCTC
CAGAAACCGA CGTCCCCGGC GAAGCACACC CACGTCACCG AGCGGTTCTA CCTGCAGGAC
GCCGTGTTCG TCGCCGCCCT CGCCGCACCC GAACCGGTGC TCACCACCCT CGCCGACGCG
CTGCGCACCC CCGCCTTTCC CCTCGCGCTC GGCCGCCGCG CCTGCCCGCC GACCCACCCC
CTCCTCCTCG TTCCCGACAG CGAGCCGGAC GCCGCTTTGT GGTCGGGCAG CGCCCTGGAG
GTCCTGCGGC AGGTGCCGTG GCAGGCCCGC CCCGACCACC GCGACGCCCT CGCCCGGCGC
AGGCCACCCC GCCTCCGCCG CATCGACCTA CCCGTCACCG TTGACGACCC AGACGGGGAC
GACGTCCGGA TCGACCTGCC GACCACCTTC GATCCCCACC AGCGAGGGTT CACCAGCCGC
CGGGTCCACC AGAGCTGGGT CCACCTCCCA CCCCCCTACG AGCTCACCGA CGCCGACAAC
GTCGAGGGCA CCACCCCGCA CCACGATCCT TTCGCGATTC TCGGATGGTG A
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| Protein sequence | MSQDPPRHCL VLRLAGPLQS WGSRSMFNRR DTLTEPTKSG IIGLLAAAQG RRRTDPIEDL
LSLTLGIRTD QPGTLLRDYH TVSDYRGRPL PSAAVSAKGL QKPTSPAKHT HVTERFYLQD
AVFVAALAAP EPVLTTLADA LRTPAFPLAL GRRACPPTHP LLLVPDSEPD AALWSGSALE
VLRQVPWQAR PDHRDALARR RPPRLRRIDL PVTVDDPDGD DVRIDLPTTF DPHQRGFTSR
RVHQSWVHLP PPYELTDADN VEGTTPHHDP FAILGW
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