| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0017 |
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| Symbol | |
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| ID | 3903592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 22428 |
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| End bp | 25316 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877347 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_479140 |
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| Protein GI | 86738740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGT CCATTATATC TGGGATGGGA GTCTTCATGG ATGATGAGTT CTTCGGTATG
ATATGGGGGA AGTCGGCGGA GAAGGCGGGG GGATCGATGC ACCTGCTCCT CGGCCATCTT
CTGGATACGG CGGCGGTGGG CGAACTTGTC TGGGATCGTT TCCTCGCATC CACCATTCGG
GATCGTCTGG ATGATTGCAG CGATGGTCGC GGGCGGTCTC TGTTCGCGCT GTTGTGCGGC
CTGCATGATG TCGGTAAGGC CACGCCGGCC TTTCAGATGA AGGACGAGGG TTTGGCGCAG
CGCGTTCGGG CTGCCGGGCT TGGCTGGCGA GGGGTGACTC CTCAGCAGGG CCGGCAGTGG
CATCACGCGC GGGCGGGGGC TGTCATCGTC CGCAAGTATC TCCCGCAGGT CGGTTGGAGT
CGGCCGGGGT GTGACTGGGT GTGGCCGCTG GTCGCGGGCC ATCACGGCCT GATACCGGAC
CGTGGCCGTC TTGTGCACAA GCCCGCCGTC CACGGCGCCG GACCGTGGCT CGACGTCCAA
CGTGCGTTCG TCGACCGGGT GGCCGGCGAC CTCAACGTTG ACCTGGCTTC CTTTTCGGAG
CTGCGAACAC CATCCCGCGG AGGTCAGCTT GCCCTATCCG GGATGATCAT CATGGCAGAC
TGGGTCGCGA GCGACAAAGA GCATTTCGGT GGGCTGTCGG ATCTGGCGGA GATCTCGATG
AAGGGCTCGC GGGAGCGTGC ACAGCGAGCC TGGGCACAGT TGGGTCTGCG TGGCGGGTGG
CGCTCCGACC GGCCCGCACC CGGCAACCAG TCTGACCTGG TGCACCACAG ATTCGGTAAG
CCAGCCCGGC CGGCGCAGCG CGCCGCGGTC CAGGCCGTGC GGGAAATGCC CGGCCCCGGG
CTACTGATCC TGGAAGCGCC GATGGGTGAG GGGAAGACGG AGGCGGCGCT CGCCGCCGCG
GAGGTACTGG CCGGCAAGGT CGGTGCGGAT GGGGTGTTCG TCGGAATGCC GACGCAGGCG
ACGAGCGATC CGATGTTCAG CCGGGTCCGC GGCTGGCTCA CCGCGGTGGA TCCCGAGGTT
CCGATCGGCC TACTGCACGG CCGGGCTCGT TTCAACAAGG AGTGGGCGGC ACTTCGGTCG
CAGGTCCGGT TCGTCGACGT GCATGACGAT CTCGACGAGT ATGGGATGGC CGACGATTTC
GGTACGGGTA CGAGCGGCCC GGGTCGTCGC GACGCACCGC TGGCGGGCGC CGCGGCGGCC
GCGGAGTGGT TCTTCGGATC GAAACGGGGG TTGCTCGCTG CGGTGACGGT CGGCACGGTG
GATCACCTGC TGCAGGCGGC GACCCGGACG AAGCATGTGA TGCTACGGCA CGCCGGCCTG
GCCGGCCGGG TCGTCATCCT TGACGAGGTA CACGCCTACG ACGTCTACAT GGCGCAGTTC
CTGTTCGAGG CGTTGCGCTG GCTCGCCGAC ACCGGCGTGC CGGTCATCGT TCTGTCCGCG
ACGCTGCCGC CGGTACTGCG TGCACAGCTC GCCGGCGCCT ATCTGCAGGG CGCCCTGCAG
CGCCCCGATG TCGACCTCGC CGATCTGCCG CGGCCCACCG GCTACCCGAG CACCACCGCG
GTGTATATGG CCGACGGGAA GCCCCGGTTT TCCGTGACGT CCCAGTCACC CTGGCGTGAG
TCCGTGCCCG TTGCGGTAGA GATCCTGGCA GAGCCCACCG ACTTCGCCCC GGTGAGCATC
GCCGCCGCTG TCTCGGCGGA GGTGAGCGAG GGCGGCTGCG CTCTCGTCGT GTGTAACACC
GTCCAGCGGG CCCAGGTCGT CTACGCCGAG CTGCGGACGA CGTTCGGTGA TGACGTGGTG
CTGCTGCACT CCCGGTTCAC CGCAGCCGAA CGCGCGAGCC GTACGGAAGA CGTCGTGGAC
AAGCTCGGCC CCCCCGGACG GGAGAACGCC CAGGACCGGC CCGCGCGGCT CGTCGTCGTG
GCCACCCAGG TGGCCGAACA GTCGTTCGAC GTCGATGTGG ACATCCTCGT CACCGATCTC
GCCCCCATCG ACCTTCTGCT GCAACGGGTC GGCCGGCTGC ATCGGCATGA CCGGCCGACC
GGGCAGCGAC CGGCCCGGCT TCGCGACCCG AAAGTGATCG TCAGCGGTCT GCGGCTGCCC
GACGGGGCTG TGCCACTCTG GCCCGCCGGT AGCCGGGCCG TGTACGGGGA TCATCTACTG
CTGCGCTCCG CCGCTCTCGT CGCCGAAGCC GCCACGGGTG GTGGATGGTC GATTCCCGCC
GACGTGCCCG GCCTCGTCGC TCTCGGCTAC GGTGATGAGC CTCTCGGTCC GGCGCGCTGG
GCTGATGCCG CGGCCGAGGC CAGGCAGGAA TGGGAGGCCA AGGAGCGTCG TCGCCGGGTG
AACGCCACCG GATTTCTGCT TTCCGGCGAG GACGGTCTGG GCCTGACCAC GCTCGAGGGT
CTGCACGACA AGGCGACCGC GCCGCTGGAA ACCGAGGAAC GCCTCACCGC GGTCGTCCGT
GACAGCGACG AGTCCGTGGA GGTCGTCCTC GTCCGCCGCG GACCGGCCGG GTATCTCACG
CTCGCGGGCC GATCGCTCGG GCACATCGGC GAAGTTGCCG TGTCTGACGA CGCGGTCCTC
GAAGAGGTCG TCGGAGCCAC CATCCGCCTG CCCGCGAACA AGGAGATCAC CGCCGCGGCG
CATGCCGAAC TGACTCCCCT GGCCGGCTGG GACGGCGACT CCTGGCTCCG CCGCACCCGC
GCCCTGATTC TCGACGATCG CATGTCGGCG ATCCTCGGGG GGCGACACCT GACCTATGAC
AACAAGCTCG GGCTGAGCCT CGCGCCTCGA CCGGCTGCTG ATACTCGACC GGCTGCTGGT
AAAGGGTGA
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| Protein sequence | MGLSIISGMG VFMDDEFFGM IWGKSAEKAG GSMHLLLGHL LDTAAVGELV WDRFLASTIR
DRLDDCSDGR GRSLFALLCG LHDVGKATPA FQMKDEGLAQ RVRAAGLGWR GVTPQQGRQW
HHARAGAVIV RKYLPQVGWS RPGCDWVWPL VAGHHGLIPD RGRLVHKPAV HGAGPWLDVQ
RAFVDRVAGD LNVDLASFSE LRTPSRGGQL ALSGMIIMAD WVASDKEHFG GLSDLAEISM
KGSRERAQRA WAQLGLRGGW RSDRPAPGNQ SDLVHHRFGK PARPAQRAAV QAVREMPGPG
LLILEAPMGE GKTEAALAAA EVLAGKVGAD GVFVGMPTQA TSDPMFSRVR GWLTAVDPEV
PIGLLHGRAR FNKEWAALRS QVRFVDVHDD LDEYGMADDF GTGTSGPGRR DAPLAGAAAA
AEWFFGSKRG LLAAVTVGTV DHLLQAATRT KHVMLRHAGL AGRVVILDEV HAYDVYMAQF
LFEALRWLAD TGVPVIVLSA TLPPVLRAQL AGAYLQGALQ RPDVDLADLP RPTGYPSTTA
VYMADGKPRF SVTSQSPWRE SVPVAVEILA EPTDFAPVSI AAAVSAEVSE GGCALVVCNT
VQRAQVVYAE LRTTFGDDVV LLHSRFTAAE RASRTEDVVD KLGPPGRENA QDRPARLVVV
ATQVAEQSFD VDVDILVTDL APIDLLLQRV GRLHRHDRPT GQRPARLRDP KVIVSGLRLP
DGAVPLWPAG SRAVYGDHLL LRSAALVAEA ATGGGWSIPA DVPGLVALGY GDEPLGPARW
ADAAAEARQE WEAKERRRRV NATGFLLSGE DGLGLTTLEG LHDKATAPLE TEERLTAVVR
DSDESVEVVL VRRGPAGYLT LAGRSLGHIG EVAVSDDAVL EEVVGATIRL PANKEITAAA
HAELTPLAGW DGDSWLRRTR ALILDDRMSA ILGGRHLTYD NKLGLSLAPR PAADTRPAAG
KG
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