Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0016 |
Symbol | |
ID | 3902963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 20624 |
End bp | 22171 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637877346 |
Product | acyltransferase 3 |
Protein accession | YP_479139 |
Protein GI | 86738739 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGGTCCC TTACCCCGAA GCCAGGTCAT GACCACACCA GGCGGACCTC GAAACATCGT GCCGAGGTCC CGGGTTCTGC CCGCGCCGGC TCTCCCGTCC TGGTGGGCGC AGCCCCCGCC GCCGCCGCCG CCGGTGCCGC CGCCGCCGGT GCCGCCGCCG CCGGTGCCGC CGCCGCCAGT GCCGCCGCCG CCAGTGCCGC CGCCGAGAGA GCGGCCGACC GTGCCGGTCC GGACCTCGGC CCGGCCGCGG GCCGGGGGGT GGGTATCACC GGAGAGAGCG GAGGGAACCG CCGCGGTCGC CGACGGACGA CGGTGGGCGA TCCCAGGCTC GAGCTGGTCG ACCTGGGCGG GTTCCGCGGC GTGGCGGCGA TCTCAGTGAT CATTTTTCAC GCCTATCAGT TCTGCCGCGG GGATGGCAAC ACGCCGTACG CGGGTACGTT CCTCGGCCAG GTCCTCGGCG CCTTCGACGG GATGATCAGT TGGTTCTTCC TGGTCTCCGG GTTCCTGCTG TATATGCCGA TGGCGAACCG GGTCAGGGCC GGCCGGACCC AACGGTCACC CAAGAACACG CTCATACGTC GTGGACTGCG GATTCTTCCG CTGTACTACA CGGCGCTCAT CGTCGTGTGG GCGGCGCGTA ATCCCACTCT GCCCGGCGAC TGGATCGACC TGGTCGAACA CCTGACCTTC ACCCAGGTCT TCGACAGCAA GCGGGTGTTC TACACGATCG GCCCGGCCTG GTCGCTGGCC GTCGAGGTCT ACTTCTATCT ATACCTCGCC CTGGTCGCCG GCTGGCTGCG GCGGCAGACT CATCGACTAC CCGAGGCGCA TCGCTGGCGG CGGCTCTGCC TGCCGCCGGT CCTGCTGATC GTGGTGTCCG CCGTCTGGAT CGTCTATGCG GTCTACATCG TGCGGGCTCA GCACGACCAG TGGGCGTACT GGTTCTCGCC GCAGAACTAT GCCGGCAACT TCGGCCTCGG AATGATCACT GCGGTTCTCT ATGTCCGATG GGGTCGGGAG CGGCCGTTGC CCGCCCTGCT CGCGTGTGCG TTGCGGTTTG TCGCCGCCGG GCTCATCATC GCCGGCGCGC TGGTCCGGGG GCACACCGCG GCATCGTTCG AGGCGTTCTC CACGCTGAAT TCAATCGGTT TCGGTGTGCT GTTCGCCGCA TCCGTGCTGG CACCCCGCGA CACGCTGTGG CGCCGGTTCT TCGCCACCCC GGCATTCGTC TGGCTCGGCA TGATCAGCTA CAGCGTGTAT CTGTGGCATG AGCCGATTCT GCTGCTGGTG CTGGACCGGC ACGGGCTGGT CAGTCATGCG CCGTCGGCGT TTCCGTGGGT GGCCGCCATG CTGGTCACGG TCGGCGTCCT CGGTGGATGG ATCAGCTACG TCGTCCTGGA GAAACCGGGC CGCCGGCTGT CCATCCTGGT GGAGAAGCTC CGCCGCACCC CGGTGTCCGC CTCGGTGTCC CCCGCCTTGG TGTCCCCCGC CCCGGTGTCC CCCGCCCCGG TGTCCACCCC GGTGCGACCG GCACGGCCAG TTCCCTGA
|
Protein sequence | MWSLTPKPGH DHTRRTSKHR AEVPGSARAG SPVLVGAAPA AAAAGAAAAG AAAAGAAAAS AAAASAAAER AADRAGPDLG PAAGRGVGIT GESGGNRRGR RRTTVGDPRL ELVDLGGFRG VAAISVIIFH AYQFCRGDGN TPYAGTFLGQ VLGAFDGMIS WFFLVSGFLL YMPMANRVRA GRTQRSPKNT LIRRGLRILP LYYTALIVVW AARNPTLPGD WIDLVEHLTF TQVFDSKRVF YTIGPAWSLA VEVYFYLYLA LVAGWLRRQT HRLPEAHRWR RLCLPPVLLI VVSAVWIVYA VYIVRAQHDQ WAYWFSPQNY AGNFGLGMIT AVLYVRWGRE RPLPALLACA LRFVAAGLII AGALVRGHTA ASFEAFSTLN SIGFGVLFAA SVLAPRDTLW RRFFATPAFV WLGMISYSVY LWHEPILLLV LDRHGLVSHA PSAFPWVAAM LVTVGVLGGW ISYVVLEKPG RRLSILVEKL RRTPVSASVS PALVSPAPVS PAPVSTPVRP ARPVP
|
| |