Gene Francci3_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0013 
Symbol 
ID3902960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp16418 
End bp16990 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content73% 
IMG OID637877343 
Producthypothetical protein 
Protein accessionYP_479136 
Protein GI86738736 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGG AGGAGGGCCT GGCGCTCTAC GCGGCGGCAA CACGGGTATC GGCCGGCGGC 
CTGATCTGCG AGGTCGGCAC CTACTGCGGT AAGTCGACCC TGTACCTGGC CGCGGCCGCC
CGGACGGTGG GAGCGACGGT GATCACCGTG GATCATCATC GCGGGTCGGA GGAGAACCAA
CCCGGGTGGG AGTACCACGA CGCCGATCTC GTCGACCCGC GTAGCGGCCG GCTGGACACG
CTGCCCTTCC TGCGGCGGAC GCTGGAGGAC GCGGGCGTCG AGGACGTCGT GACGGCGGTC
GTCGGCCGCT CCGAACGGGT GGGGCGATGG TGGTCGACCC CGGCCGACCT GCTCTTCCTC
GACGGCGGGC ACACCGAGGA GCAGGCCCAG GCGGACTACG AGGCCTGGGC CTGCCACGTG
CGGCCCGGCG GTCTCCTGGC CATCCACGAC GTCTTTCCGG ACCCGGCGGA CGGGGGCCAG
GCGCCCTACC ACGTCCTGGT GCGGGCGCTG ACGGAGGGCT TCCGCGAGCT GTCGTGCGCG
GGTTCGCTGC GCGTCCTACG CCGCGTCGAC TGA
 
Protein sequence
MPTEEGLALY AAATRVSAGG LICEVGTYCG KSTLYLAAAA RTVGATVITV DHHRGSEENQ 
PGWEYHDADL VDPRSGRLDT LPFLRRTLED AGVEDVVTAV VGRSERVGRW WSTPADLLFL
DGGHTEEQAQ ADYEAWACHV RPGGLLAIHD VFPDPADGGQ APYHVLVRAL TEGFRELSCA
GSLRVLRRVD