Gene Francci3_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0012 
Symbol 
ID3902959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp15254 
End bp16435 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID637877342 
Producthypothetical protein 
Protein accessionYP_479135 
Protein GI86738735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCCGG TTGAGTCTGC TCCGGTCCTG ACCCCCGAGG CGCTCACCGC GACCGCGACC 
GCGATCGCCG TCGTCCAGGA GCCGGACGGC GCCATCCCCT GGTATCCCGG TGGCCACACC
GACCCGTGGG ATCACCTCGA ATGCGCCATG GCCCTCGACC TCGGCGGCCT GGTCGACGCC
GCCGACGCCG CGTGGGCCTG GCTGTGTCGC AACCAGCGGC CGGATGGATC CTGGGCGACG
AGCTACGTCG GCGGCGCGGT CAAGGAGGAC TTCGCCGACA GCAACCAGTG CGCCTATGTC
GCCACCGCAG CCTGGCACCG CTGGTTGGCC ACCGGTGACC GCGCCTTCCT CACGAGGATC
TGGCCGGTCG TCGAGGCAGC CCTGGGCTTC GTCGTCGACA TGCAGAGCCC GACCGGACAG
ATCTGGTGGG CCCGGTCGTC GGACGGTGTC GACTACCCCG AGGCCCTGCT GACGGGATGC
TCCAGCACGT TGCACAGCCT GCGCTGCGGG ATGGCGCTCG CAGCCCTGGT CGGGGAGGTG
CCACCGGCCT GGGAACGGGC GACCGGCGCG CTGCGGCACA CCCTCGTCGC TCACCCAGAG
TACTTCGCCC CCCGCGACCG GTGGTCGATG GACTGGTACT ACCCGGTGAT CGGCGGAGCG
CTGCGCCGGT CCGCGGGTCG GTCCCGGCTC ACCAGCCGGT GGAACGACTT CGTCGTCGAC
GGTCTGGGCA TCCGCTGCGT GGCCGACGAG CCCTGGGTCA CGGGGGCCGA GACCTGCGAA
CTAGCCATCG CCCTGCATCT CGTGGGCGAG ACCGCCGCGG CGACCAAGCT GGTTACGGAC
ATGCAGCACC TGCGGCACGC CGACGGGAGC TACTGGACGG GCTGGCAGTT CGAGACCGCG
ACGTTCTGGC CGGCCGAACA GTCGACCTGG ACCGCGGCGG CGGTGATCCT CGCGGTCGAC
ACGTTGGCCG GCGGGGTCAC CGAGACCCTC TTCCGCGGCG ACGGCCTCCC CGAGGGGATC
TGTGTCCTCG ACAAGGAGTC CGACGAGCCT CGGCAGGGCG GCAGGCGGCT TCCGGAGTCG
CGGACGGAGC CGCGGACGGG GACGGAGGTG GTGACGCCCG CCGAACGCCG GCTTCCTCGG
CAGCGGCCGG CATGCGGATG CCGCTCAGTC GACGCGGCGT AG
 
Protein sequence
MRPVESAPVL TPEALTATAT AIAVVQEPDG AIPWYPGGHT DPWDHLECAM ALDLGGLVDA 
ADAAWAWLCR NQRPDGSWAT SYVGGAVKED FADSNQCAYV ATAAWHRWLA TGDRAFLTRI
WPVVEAALGF VVDMQSPTGQ IWWARSSDGV DYPEALLTGC SSTLHSLRCG MALAALVGEV
PPAWERATGA LRHTLVAHPE YFAPRDRWSM DWYYPVIGGA LRRSAGRSRL TSRWNDFVVD
GLGIRCVADE PWVTGAETCE LAIALHLVGE TAAATKLVTD MQHLRHADGS YWTGWQFETA
TFWPAEQSTW TAAAVILAVD TLAGGVTETL FRGDGLPEGI CVLDKESDEP RQGGRRLPES
RTEPRTGTEV VTPAERRLPR QRPACGCRSV DAA