Gene Francci3_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0011 
Symbol 
ID3902958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp14536 
End bp15267 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID637877341 
Productmethyltransferase type 11 
Protein accessionYP_479134 
Protein GI86738734 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG TCGACTTCGA CCAGTTTCCC GTCTCCGCGG GCTGCCGGCT GCTCGACCTG 
GGCTGCGGCG CCGGACGGCA CACGTTCGAG GCGTTCCGAC GGGGCGCCGA GGTCATCGCG
CTGGACCACT CCGCCGGCGA GGTCGCCGGC GTCAACGCGA TGCTCGCCGC GATGGCCCTG
GAGGGACAGG CTCCGCCCAA GGCGAAGGCC GCCGGAGTGC GCGGTGACGC GCTGGCGCTG
CCGTTCGCCG ACGGCACCTT CGACCGGATC ATCGCCGCCG AGGTGCTCGA ACACCTGCCC
GCCGACACGG CGGCGATGAC GGAGATCGCC CGGGTGCTAC GGCCCGGGGG GTGGGTGGCG
GTCACCGTCC CGAACCGGTT CCCCGAGCAG GTGTGCTGGA GCCTGTCGAC GGCTTATCAC
AGCGTCGAGG GGGGCCATGT CCGCATCTAC CGCCGGGACG AGCTTCGTGA CCGGTTGATC
GCGGTGGGAC TGGAACCGGC CGGCACCCAT TTCGCACACG CCCTGCACGC CCCGTACTGG
TGGCTGCGGT GTCTCGTCGG TGTCCACGAC GACGACCATC CGGCGACGCG GCTTTACCAC
CGGCTGCTGG TGTGGGACAT GATGCGCCGT CCCCGCATCA CCCGGCTCGC CGAGCGGGCC
CTCAATCCGA TCATCGGCAA GAGCATCGTG CTGTATTTGA GGAAACCGGA GGTAACGCGT
GCGGCCGGTT GA
 
Protein sequence
MLTVDFDQFP VSAGCRLLDL GCGAGRHTFE AFRRGAEVIA LDHSAGEVAG VNAMLAAMAL 
EGQAPPKAKA AGVRGDALAL PFADGTFDRI IAAEVLEHLP ADTAAMTEIA RVLRPGGWVA
VTVPNRFPEQ VCWSLSTAYH SVEGGHVRIY RRDELRDRLI AVGLEPAGTH FAHALHAPYW
WLRCLVGVHD DDHPATRLYH RLLVWDMMRR PRITRLAERA LNPIIGKSIV LYLRKPEVTR
AAG