Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0010 |
Symbol | |
ID | 3902957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 13122 |
End bp | 14525 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637877340 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_479133 |
Protein GI | 86738733 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.785418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGATTG CGTTGTTGTC GTACCGGAGT CTGCCCACCT GCGGTGGCCA GGGTGTGTAC GTCCGACATC TGTCCCGCGA ACTGGTCGCC CTGGGGCACC GCGTCCAGGT GGTGAGCGGG CCGCCGTACC CGGTGCTTGA GGAGGGTGTC GGCCTCACCG AACTGCCCAG CCTTGATCTC TACCGGGACT CCGACCCGTT CCGGTGGCCC GGACTGGCCG AGTTCCACGG CCTGCCGGAC GTCGTCGAGT TCGCCATGAT GCGGACCGGC CAGTTCTCCG AGCCGCTCGC CTTCAGCCTG CGTGCCTGCC AAGCCCTGCG CCCCAGGGCA TCCGGGGGTC GGCCGCCGTT CGACATCGTC CATGACAACC AGGGGCTGGG ATACGGCCTG CTGGCGCTGC GGGCAGCCCT GCGCCCGTAC CGGATCCCGG TCGTGGGCAC CGTGCATCAT CCGATCACGG TCGATCGCCG CCTGCACCTC GCCGCGGCGA CCACCTTCAC CTCCCGGCTG GGCCTGCGCC GGTGGTACTC GTTCCTCCCG ATGCAGGCCC GGGTCGCGCG GGGGCTGGAT GGCATCGTCA TCCCGTCGGA GAGCTCCCGG CGAGAGATCA TCGCGGACAT GAACCTCCCC CCGACGGTCA TGCGCACGGT TCCCTTGGGA GTCGACGCCG ACGTCTTCAC GCCGGCGCCC GCGGGCAATC CGGCGGTTCC GGGCCGTGTC GTCGTCGTGA CCAGCGCCGA TGTTCCGCTT AAGGGCCTGC TTGTCCTGCT CGAGGCGCTC GCGAAGCTGC GGGTGGATCG CTCGGCGCAC CTGGTCTGCG TCGGCAAGGT CCGCGAAGGG GGAACGGCCC AGCGCCAGGT TGCCGAGCTG GGCCTGGCCG ACGCCGTGAC GTTCCGTTCC AACATGCCGG AACCGGAGCT GGTGGACCTG TTGCGCTCCG CCGAGGTCGC GGTCGTTCCC TCGCTTTACG AGGGGTTCAG CCTGCCCGCC GTCGAGGAGA TGGCCTGCGG GATCCCGCTG GTCGCCACCA CCGCCGGGGC GTTGCCCGAG GTCGCCGGTC CGGACGGGGA GGCCGCGTTG CTGGTCCCAC CGGGGGATGC GGGAGCCCTG GCGGACGCCA TCGGTTCCCT GCTCGATGAT CCCGAACGAC GGGCCCGAAT GGGTGCCGCC GGGCGCCGCC GGGTGGAGGC GCGGTTCTCC TGGCGGGCGG CCGCCGCGGC CACCGCGGAC TGGTACGCCG AGCGGATCGC GGCGGTCGGC GGGACGCCCA CCTCCCCGGT CCCGGCCCCG GGACCGGGAC CGGGACCGGC GGCCCAGTGG ACGCCGGCAC CGCTGTCCAC ACCCGGCGCC GTCACACCCG GCGCCGCGGC GTCCGCACCG GCGTCGTCGA CGCTGACCGG CTGA
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Protein sequence | MRIALLSYRS LPTCGGQGVY VRHLSRELVA LGHRVQVVSG PPYPVLEEGV GLTELPSLDL YRDSDPFRWP GLAEFHGLPD VVEFAMMRTG QFSEPLAFSL RACQALRPRA SGGRPPFDIV HDNQGLGYGL LALRAALRPY RIPVVGTVHH PITVDRRLHL AAATTFTSRL GLRRWYSFLP MQARVARGLD GIVIPSESSR REIIADMNLP PTVMRTVPLG VDADVFTPAP AGNPAVPGRV VVVTSADVPL KGLLVLLEAL AKLRVDRSAH LVCVGKVREG GTAQRQVAEL GLADAVTFRS NMPEPELVDL LRSAEVAVVP SLYEGFSLPA VEEMACGIPL VATTAGALPE VAGPDGEAAL LVPPGDAGAL ADAIGSLLDD PERRARMGAA GRRRVEARFS WRAAAAATAD WYAERIAAVG GTPTSPVPAP GPGPGPAAQW TPAPLSTPGA VTPGAAASAP ASSTLTG
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