Gene Francci3_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0009 
Symbol 
ID3902955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp11810 
End bp12496 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID637877338 
Producthypothetical protein 
Protein accessionYP_479132 
Protein GI86738732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGA GCCGTACCAC GAAGCCCGAC AGGAACCGTG CCGCGCCCGA GCGCATGCCC 
GCCCCCGATC CGGTACGCCC CGCCCCGCCG GGTCCGGCGG GGGGGAGGTC CGGCGGTGCC
GGCCCCACGG CGGCCTACGA CCGGCCGCTC GCGGCGCCGG AGTCCGCGGG TACCACCACG
ACGACGGGTG CTCTGAACAG CGTGACCACG ACCTCCCCCG GTGCGCTCGA CGACCAGTTC
GAGCCGGTCT CCGCTGAGCG GGCGGGTGCC GGTCACTCCC CTGGCCGGTC CGGTCCCGGC
TCGTCCGGTT CCGCCCGCCC GCCCGGTCAG GGCCGGCGGG CCAAGCTCAA GCTGTCCAAG
GTCAATCCCC TCACGGTGAC CCGGGTCAGC TTCGCGTTCT CCCTCTGCGT CTTTGTGGTT
CTGCTCGTCG CGATCGCCGT GCTGTGGTTC GTCCTGAACT CGATCGGCGT GTTCGACAGC
GTCTCCGACG CGGCCGATAC CCTGACCGAC AGCAGCAGCA CCGACATCCG AGGATGGCTG
TCGTTCGGCC GGGCAATGCA GATCAGCTTG CTCATCGGGG CGATCAACGT CATCCTCATG
ACCGCGCTGT CCACGCTCGG TGCCCTGCTC TACAACCTCT GCGCCGAGAT GATCGGCGGC
GTCGAGCTGA CTCTGAGTGA TCAGTAG
 
Protein sequence
MTRSRTTKPD RNRAAPERMP APDPVRPAPP GPAGGRSGGA GPTAAYDRPL AAPESAGTTT 
TTGALNSVTT TSPGALDDQF EPVSAERAGA GHSPGRSGPG SSGSARPPGQ GRRAKLKLSK
VNPLTVTRVS FAFSLCVFVV LLVAIAVLWF VLNSIGVFDS VSDAADTLTD SSSTDIRGWL
SFGRAMQISL LIGAINVILM TALSTLGALL YNLCAEMIGG VELTLSDQ