Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0009 |
Symbol | |
ID | 3902955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 11810 |
End bp | 12496 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877338 |
Product | hypothetical protein |
Protein accession | YP_479132 |
Protein GI | 86738732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGGA GCCGTACCAC GAAGCCCGAC AGGAACCGTG CCGCGCCCGA GCGCATGCCC GCCCCCGATC CGGTACGCCC CGCCCCGCCG GGTCCGGCGG GGGGGAGGTC CGGCGGTGCC GGCCCCACGG CGGCCTACGA CCGGCCGCTC GCGGCGCCGG AGTCCGCGGG TACCACCACG ACGACGGGTG CTCTGAACAG CGTGACCACG ACCTCCCCCG GTGCGCTCGA CGACCAGTTC GAGCCGGTCT CCGCTGAGCG GGCGGGTGCC GGTCACTCCC CTGGCCGGTC CGGTCCCGGC TCGTCCGGTT CCGCCCGCCC GCCCGGTCAG GGCCGGCGGG CCAAGCTCAA GCTGTCCAAG GTCAATCCCC TCACGGTGAC CCGGGTCAGC TTCGCGTTCT CCCTCTGCGT CTTTGTGGTT CTGCTCGTCG CGATCGCCGT GCTGTGGTTC GTCCTGAACT CGATCGGCGT GTTCGACAGC GTCTCCGACG CGGCCGATAC CCTGACCGAC AGCAGCAGCA CCGACATCCG AGGATGGCTG TCGTTCGGCC GGGCAATGCA GATCAGCTTG CTCATCGGGG CGATCAACGT CATCCTCATG ACCGCGCTGT CCACGCTCGG TGCCCTGCTC TACAACCTCT GCGCCGAGAT GATCGGCGGC GTCGAGCTGA CTCTGAGTGA TCAGTAG
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Protein sequence | MTRSRTTKPD RNRAAPERMP APDPVRPAPP GPAGGRSGGA GPTAAYDRPL AAPESAGTTT TTGALNSVTT TSPGALDDQF EPVSAERAGA GHSPGRSGPG SSGSARPPGQ GRRAKLKLSK VNPLTVTRVS FAFSLCVFVV LLVAIAVLWF VLNSIGVFDS VSDAADTLTD SSSTDIRGWL SFGRAMQISL LIGAINVILM TALSTLGALL YNLCAEMIGG VELTLSDQ
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