| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0003 |
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| Symbol | |
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| ID | 3902949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2488 |
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| End bp | 3696 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877332 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_479126 |
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| Protein GI | 86738726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000138278 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCC GGGTGGAACG GGACGAATTC ACCGAAGCGG TCGCCTGGAC CGCACGCACG
TTGCCGAGCC GGCCGACCAC CCAGTTGCAG GTGCTCTCGG GCCTGCTCCT CGACGCGACC
GGACCGATAC TCAAGATCGC CGCGTACGAC TACGAGGTGG CCGCCCAGTG CACGGTGCAC
GCGACCGTGT CGGAGGAGGG GCGCGGGCTC GTCAACGGCA AACTGCTCGC GGAGATCACC
CGGGCGCTGC CCGCGGCACC GGTCGATCTG GGCATCGACG GCACCCGCCT GGTGATCACT
TGTGGCAATG CTCGGTTCGC GTTGCCGATG CTGCCGGTGG ACGACTATCC CGCCCTTCCG
GCCATGCCCC CGATCACGGG GCACATCGAG GGATCCGCGT TCGCCGCGGC GGTCTCACAG
GTGGCGATCG CGGCCGGTCG TGACGACACG CTGCCGGTCC TCACCGGGGT CCGTATCGAG
ATCGAGGGGG ACACTCTCAC CCTCGCCGCG ACCGACCGTT ACCGGCTCGC CGTGCGGACG
TTGAAGTGGC GGCCGTCGGA GACAGCCGCC GGGCCCGATG AGGACGGCGT GACCGGTGTG
GACGGCCCCC CGCCCACACC GGTCACTGTC GCTCTCGTGC CGGCCCGCAC CCTGCTCGAC
ACCGCGAAGT CGTTGTCGGG TTCGGGGGTG GAGGTATCCA TCGCGCTCGG GACCGGCCCC
TCCGGCGAGA CGCTGGCCGG TTTCGCCGGC TCGACCCGGC AGACGACGAC CCGGTTGCTC
GACGGAAGCT TCCCGCCCTA CCGCAAGCTG TTGCCTGACA GTTCGCCGTT GATCGCGCAG
CTGGAGATCG CCCCGTTGCA GGAGGCCGTC AAACGGGTGG CGCTGGTCGC CGCGAAGACC
GCACCGGTGC AGCTGACGTT CTCCCCGGAC CACCTCGTGC TGGAGGCCGG GACGGGCGGT
GAGGCGCAGG CGACGGAGAC CCTCCCGGTG ACCTACGACG GACCGGAGCT GTCCGTGGCG
TTCAACCCGT CGTACCTGCT CGACGCACTC GGGGCGCTGG AGTCGGACGT CGTACGGATC
GGTTTCGCCA GCGCGGAGGA CCCGGCGGTG GCGGCGAACA AGCCGGCGAT CCTGACCGGG
AAGGCCGACG ACGACGGCGA GGTCCCCGAC TACCGGTACC TGCTGATGCC GATCCGCCTG
CACGGGTGA
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| Protein sequence | MKFRVERDEF TEAVAWTART LPSRPTTQLQ VLSGLLLDAT GPILKIAAYD YEVAAQCTVH
ATVSEEGRGL VNGKLLAEIT RALPAAPVDL GIDGTRLVIT CGNARFALPM LPVDDYPALP
AMPPITGHIE GSAFAAAVSQ VAIAAGRDDT LPVLTGVRIE IEGDTLTLAA TDRYRLAVRT
LKWRPSETAA GPDEDGVTGV DGPPPTPVTV ALVPARTLLD TAKSLSGSGV EVSIALGTGP
SGETLAGFAG STRQTTTRLL DGSFPPYRKL LPDSSPLIAQ LEIAPLQEAV KRVALVAAKT
APVQLTFSPD HLVLEAGTGG EAQATETLPV TYDGPELSVA FNPSYLLDAL GALESDVVRI
GFASAEDPAV AANKPAILTG KADDDGEVPD YRYLLMPIRL HG
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