| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0001 |
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| Symbol | |
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| ID | 3902947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 35 |
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| End bp | 1723 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877331 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_479125 |
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| Protein GI | 86738725 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000690317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAACC TCCGCGCCGA CTCCGTCGCC GGTCTGCCGT TCGGGGACGA GCCTTCGGGT
GACCCGGACC TGGCCGCGGT GTGGAGCCAG GCCGTCGCCG GGGTCGCCGA CGGCACGCTG
TCCGCCCAGC AGCGTGCCTG GCTGCGGCTG ACCCGCCCCC TCGGGCTCGT CCAGGACACG
GCTCTGCTGG CCGCGCCGAA CGAGTTCACC AAGGATCTCC TCGACTCGCG CCTGCGCCCC
TTCTTGTCCA CAGCGTTGTC CACAGCCTAT GGGCGGGAGA TCAGGGTCGC GGTCACCGTC
GAACACCTGC CCGATCCGGA ACCAATGAGC GGACCGATCC GGATCGTACG GCCGGTGGAT
GCCAGGGGCG ACACCACACC CGGCCAGGGC TCGGGCCCCG CCTCCGGTTC GGCGTTGAAC
GCGGGTACCG GATCAGGATC GACCGGCGCC GCCGCAGCCC CGGTGCCGCC GACGAGCCCG
GGCTCGTCGG CGGTGCCGGT GCCGGCGCCG GCACCGGCAC CAGTGCCGCC GGCGCCGGCG
GCACTGGTGA ACGGCGAACT GCCCTTCCCC GACGCCACCG AGGGAACACC ACCGGTACGG
GTCAGCGCGG GTCTCGGACG CGATGCGGCG CCGCACGAGA CCGAACCGGC CCAGGCCCGG
CTGAACCCCC GCTACATTTT CGAGACGTTC GTCATCGGCG ACAGCAACCG GTTCCCCCAC
GCGGCAGCGG TGGCCGTCGC CGAGGCACCC GCGAAGGCCT ACAACCCGCT TTTCATCTAC
GGGGACTCCG GGCTCGGCAA GACTCACCTT CTGCACGCGA TCGGTCACTA CGCACTCAAG
CTCTACCCGA ACATGCGGGT GAAGTACGTG AGCTCCGAGG AGTTCACCAA CGACTTCATC
AACTCGATCC GGGACGACCG CCAGCAGGCG TTCCAGCGGC GCTACCGTGA CATCGATGTC
CTGCTCGTTG ACGACATCCA GTTCCTGGAG AACAAGGAAC GGACGCAGGA GGAGTTCTTC
CACACCTTCA ACGTCCTGCA CGACGGCGAG AAGCAGATCG TGATCAGCTC CGACCGCTCG
CCCAAGCAAC TCTCGGCCCT GGAGGACCGG CTGCGCAGCC GCTTCGAGTG GGGGCTGATG
ACCGACATCA CCCCGCCCGA CCTCGAGACG CGCATCGCCA TCCTGTCGAA GAAGGCGGCT
ACGGAGCGCC TGCCGGTACC CCCGGATGTC CTCGAGTACA TCGCCACGCA CATCGAGCGC
AACATCCGTG AGCTGGAGGG GGCGCTGATC CGGGTCGCGG CCTTCGCGAG CTTGAACAAG
TCCCACGTCG ACCGCACGCT CGCCGAGATC GTGCTGCGTG ATCTCATCCC CGATGCCGGC
AATCCCGACA TCACGGCCGC CGCCATCATG AACGCGACGG CGGCGTACTT CGGCGTCTCG
ATGGAGGACC TGTGCGGCAC CTCACGTAGC CGCGTGCTGG TCACCGCCCG TCAGATCGCG
ATGTACCTGT GCCGGGAGCT GACCGACCTG TCGCTACCGA AGATCGGCCA GCACTTCGGG
GGTCGGGATC ATACGACGGT CATGCATGCC GATCGCAAGA TCCGCGGTCT GATGGCGGAA
CGGCGCGCGA TCTACAACCA GGTCACCGAA CTGACAAACC GCATCCGTCT GCAGGCCCGG
CAGGCCTAG
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| Protein sequence | MSNLRADSVA GLPFGDEPSG DPDLAAVWSQ AVAGVADGTL SAQQRAWLRL TRPLGLVQDT
ALLAAPNEFT KDLLDSRLRP FLSTALSTAY GREIRVAVTV EHLPDPEPMS GPIRIVRPVD
ARGDTTPGQG SGPASGSALN AGTGSGSTGA AAAPVPPTSP GSSAVPVPAP APAPVPPAPA
ALVNGELPFP DATEGTPPVR VSAGLGRDAA PHETEPAQAR LNPRYIFETF VIGDSNRFPH
AAAVAVAEAP AKAYNPLFIY GDSGLGKTHL LHAIGHYALK LYPNMRVKYV SSEEFTNDFI
NSIRDDRQQA FQRRYRDIDV LLVDDIQFLE NKERTQEEFF HTFNVLHDGE KQIVISSDRS
PKQLSALEDR LRSRFEWGLM TDITPPDLET RIAILSKKAA TERLPVPPDV LEYIATHIER
NIRELEGALI RVAAFASLNK SHVDRTLAEI VLRDLIPDAG NPDITAAAIM NATAAYFGVS
MEDLCGTSRS RVLVTARQIA MYLCRELTDL SLPKIGQHFG GRDHTTVMHA DRKIRGLMAE
RRAIYNQVTE LTNRIRLQAR QA
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