Gene Adeh_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_4167 
Symbol 
ID3887987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp4793919 
End bp4795424 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content66% 
IMG OID637865725 
Productsigma-54 (RpoN) 
Protein accessionYP_467368 
Protein GI86160583 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0610813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCG AGCTGAAGCA GCACCTCAAG ATGACCCAGC AGCTGGTGAT GACGCCCCAG 
CTGCAGCAGG CCATCAAGCT CCTGCAGCTC TCGCGCATGG AGCTGGTCGA TCTCATCCGC
ACCGAGATGA CCGAGAACCC CATGCTGGAG GGGGCGGACG AGAACGACGA GCAGGCGGTG
CCCGACGGCG CCAGCCCCGC CGAGCAGGCC GAGATCGAGG CGAAGCCCGA GCACAAGGAG
GCGGAGAAGG CCGAGGAGGT GAAGGGCGAG GAGGGCGCGA ACGAGATCGA CTGGGACCAG
TACCTCGACC AGTACCAGCT CCAGGGCCAC ACCGCGCCGT CCAACCGCGG CCTCTCCGAC
GAGGAGATGC CCGGCTACGA GGCCACGCTC ACCAAGAAGA CCGACCTCGT CGATCACCTG
GTGTGGCAGC TGCGCCTCTC GAACTTCACG CCCGAGGAGG AGCAGGTCGC GATGCTCATC
ATCGGGAACC TCGACGACGA CGGCTACTTC AAGATGCCGG CGGTGGAGGG CGAGGCCGAC
GAGGCCACCT CGCGCGACCC GCTGGTGCGG GTCGCGTTCG AGTCGGGGCA GGGGATCGAG
GTCGCCGAGC GGGTGCTGCG CAAGGTGCAG ACGTTCGATC CGCTGGGCGT CGCCGCCCGC
AACCTGCGCG AGTGCCTGAT GATCCAGGTG GACGCGCTCA ACGCCGACAC GCCCGAGATC
GTCGCGATCA TCGAGCGCCA CCTGAAGCAC CTCGAGTCGA AGAACTACCA GGCCATCGCC
AAGGACCTGA AGGTTCCCAT CGAGGAGGTG GTGAAGGCGG TGAAGGTGAT CAGCCGCCTC
GAGCCGAAGC CGGGCCGCGC CTACTCCGGC GAGGAGGCGC AGTACATCAC CCCCGACGTC
TACGTCCACA AGATGGGCGA CAAGTACGTC ACGGTCCTCA ACGACGACGG CCTCTCGAAG
CTGCGCATCT CCGGCATGTA CCGCGCCGCG CTCAAGAACG GCGAGGCGGG CAAGGCGAAG
GAGTACATCC AGGAGAAGCT GCGCAGCGCG GTGTGGCTCA TCCGCTCCAT CCACCAGCGG
CAGCGGACCA TCTACAAGGT CACCGAGTCG ATCGTGAAGT TCCAGCGCGA CTTCCTCGAC
AAGGGGATCG CGCACCTGAA GCCGCTCATC CTGCGCGACG TGGCCGAGGA CATCGGGATG
CACGAGTCCA CCGTCTCGCG CGTCACCACG AACAAGTACG TCCACACGCC GCAGGGCATC
TACGAGCTGA AGTTCTTCTT CAACTCGGCC ATCCAGAAGA CCGGCGGCGA CGAGATCGCG
AGCGAGGCGG TGAAGAACCA CATCCGCCAG ATCGTGGCGG CCGAGGACCC GAAGCACCCG
CACTCGGACC AGAAGATCGT CGAGCTCCTG AAGGGCCAGA ACATCGAGAT CGCCCGCCGC
ACCGTCGCGA AGTACCGCGA GGTGCTGGGG ATCCTGCCCA GCTCGAAGCG CAAGAAGTAC
TTCTAG
 
Protein sequence
MSLELKQHLK MTQQLVMTPQ LQQAIKLLQL SRMELVDLIR TEMTENPMLE GADENDEQAV 
PDGASPAEQA EIEAKPEHKE AEKAEEVKGE EGANEIDWDQ YLDQYQLQGH TAPSNRGLSD
EEMPGYEATL TKKTDLVDHL VWQLRLSNFT PEEEQVAMLI IGNLDDDGYF KMPAVEGEAD
EATSRDPLVR VAFESGQGIE VAERVLRKVQ TFDPLGVAAR NLRECLMIQV DALNADTPEI
VAIIERHLKH LESKNYQAIA KDLKVPIEEV VKAVKVISRL EPKPGRAYSG EEAQYITPDV
YVHKMGDKYV TVLNDDGLSK LRISGMYRAA LKNGEAGKAK EYIQEKLRSA VWLIRSIHQR
QRTIYKVTES IVKFQRDFLD KGIAHLKPLI LRDVAEDIGM HESTVSRVTT NKYVHTPQGI
YELKFFFNSA IQKTGGDEIA SEAVKNHIRQ IVAAEDPKHP HSDQKIVELL KGQNIEIARR
TVAKYREVLG ILPSSKRKKY F