Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_4167 |
Symbol | |
ID | 3887987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 4793919 |
End bp | 4795424 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637865725 |
Product | sigma-54 (RpoN) |
Protein accession | YP_467368 |
Protein GI | 86160583 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0610813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTCG AGCTGAAGCA GCACCTCAAG ATGACCCAGC AGCTGGTGAT GACGCCCCAG CTGCAGCAGG CCATCAAGCT CCTGCAGCTC TCGCGCATGG AGCTGGTCGA TCTCATCCGC ACCGAGATGA CCGAGAACCC CATGCTGGAG GGGGCGGACG AGAACGACGA GCAGGCGGTG CCCGACGGCG CCAGCCCCGC CGAGCAGGCC GAGATCGAGG CGAAGCCCGA GCACAAGGAG GCGGAGAAGG CCGAGGAGGT GAAGGGCGAG GAGGGCGCGA ACGAGATCGA CTGGGACCAG TACCTCGACC AGTACCAGCT CCAGGGCCAC ACCGCGCCGT CCAACCGCGG CCTCTCCGAC GAGGAGATGC CCGGCTACGA GGCCACGCTC ACCAAGAAGA CCGACCTCGT CGATCACCTG GTGTGGCAGC TGCGCCTCTC GAACTTCACG CCCGAGGAGG AGCAGGTCGC GATGCTCATC ATCGGGAACC TCGACGACGA CGGCTACTTC AAGATGCCGG CGGTGGAGGG CGAGGCCGAC GAGGCCACCT CGCGCGACCC GCTGGTGCGG GTCGCGTTCG AGTCGGGGCA GGGGATCGAG GTCGCCGAGC GGGTGCTGCG CAAGGTGCAG ACGTTCGATC CGCTGGGCGT CGCCGCCCGC AACCTGCGCG AGTGCCTGAT GATCCAGGTG GACGCGCTCA ACGCCGACAC GCCCGAGATC GTCGCGATCA TCGAGCGCCA CCTGAAGCAC CTCGAGTCGA AGAACTACCA GGCCATCGCC AAGGACCTGA AGGTTCCCAT CGAGGAGGTG GTGAAGGCGG TGAAGGTGAT CAGCCGCCTC GAGCCGAAGC CGGGCCGCGC CTACTCCGGC GAGGAGGCGC AGTACATCAC CCCCGACGTC TACGTCCACA AGATGGGCGA CAAGTACGTC ACGGTCCTCA ACGACGACGG CCTCTCGAAG CTGCGCATCT CCGGCATGTA CCGCGCCGCG CTCAAGAACG GCGAGGCGGG CAAGGCGAAG GAGTACATCC AGGAGAAGCT GCGCAGCGCG GTGTGGCTCA TCCGCTCCAT CCACCAGCGG CAGCGGACCA TCTACAAGGT CACCGAGTCG ATCGTGAAGT TCCAGCGCGA CTTCCTCGAC AAGGGGATCG CGCACCTGAA GCCGCTCATC CTGCGCGACG TGGCCGAGGA CATCGGGATG CACGAGTCCA CCGTCTCGCG CGTCACCACG AACAAGTACG TCCACACGCC GCAGGGCATC TACGAGCTGA AGTTCTTCTT CAACTCGGCC ATCCAGAAGA CCGGCGGCGA CGAGATCGCG AGCGAGGCGG TGAAGAACCA CATCCGCCAG ATCGTGGCGG CCGAGGACCC GAAGCACCCG CACTCGGACC AGAAGATCGT CGAGCTCCTG AAGGGCCAGA ACATCGAGAT CGCCCGCCGC ACCGTCGCGA AGTACCGCGA GGTGCTGGGG ATCCTGCCCA GCTCGAAGCG CAAGAAGTAC TTCTAG
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Protein sequence | MSLELKQHLK MTQQLVMTPQ LQQAIKLLQL SRMELVDLIR TEMTENPMLE GADENDEQAV PDGASPAEQA EIEAKPEHKE AEKAEEVKGE EGANEIDWDQ YLDQYQLQGH TAPSNRGLSD EEMPGYEATL TKKTDLVDHL VWQLRLSNFT PEEEQVAMLI IGNLDDDGYF KMPAVEGEAD EATSRDPLVR VAFESGQGIE VAERVLRKVQ TFDPLGVAAR NLRECLMIQV DALNADTPEI VAIIERHLKH LESKNYQAIA KDLKVPIEEV VKAVKVISRL EPKPGRAYSG EEAQYITPDV YVHKMGDKYV TVLNDDGLSK LRISGMYRAA LKNGEAGKAK EYIQEKLRSA VWLIRSIHQR QRTIYKVTES IVKFQRDFLD KGIAHLKPLI LRDVAEDIGM HESTVSRVTT NKYVHTPQGI YELKFFFNSA IQKTGGDEIA SEAVKNHIRQ IVAAEDPKHP HSDQKIVELL KGQNIEIARR TVAKYREVLG ILPSSKRKKY F
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