Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_4160 |
Symbol | ligB |
ID | 3887980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 4784950 |
End bp | 4786491 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 637865718 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_467361 |
Protein GI | 86160576 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.145262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTCG CCGAGCTCGC CGAGGTCTCC CGCGCGGTGG CCGCCACCCC GGCGCGCCTG GAGAAGATCG CGCGCCTCGC CGACGCGCTC GGCCGGCTCG CGCCGGACGA GCGCGCGGTG GGCGCGAGCT GGCTCGCCGG CGACCTGCCC GGTGGGCGCG TCGGCATCGG CGCGGCCACG CTGCGGGCGG CGCTCGAGGC GGCGCCGCCG GAGCGCAGCG GGCCGGGGCT CACGGTGGCG GAGGTGGACG CCGCCCTCCG CCGCATCGCG GCCGTGGCCG GCCCGGGCTC CGGCGCCGCG CGCCGCCGGG AGCTGGACGC GCTCCTCGCC CGCGCCGGCA ACCCCGAGCG CCGGTTCCTC GCGGCGCTCG TCCTCGGCGA GCTGCGCCAG GGCGCGCTGG AGGGCGTCCT CGCCGATGCG GTGGCGAAGG CGGCGGGGCT CCCCGCGGCG GAGGTCCGGC GCGCGGCCAT GCTCGCGGGC GCGCTCCCGC CCGTCGCGGA GGCGGCGCTC TCCGAGGGCG CCGCCGGGCT GGCGCGCTTC CGGCTGCGGG TGGGGGAGCC GGTGTCGCCC ATGCTGGCCC AGACCGCGGC GGACGTGGAC GAGGCGCTCC GGGCGCTCGG CGGCGAGGCC GCGCTGGAGT GGAAGCTCGA CGGCGCGCGG ATCCAGGCGC ACCGCGACGG CGAGGCGGTG CGGGTGTTCT CGCGCTCGCT GCGCGACGTG ACCGCGGCGG TGCCGGAGGT GGTGGCGCTC CTGCGCGCCG CGCCCGAGCC GCGGCTCGTG CTCGACGGCG AGGCCATCGC GCTCCGCGCC GACGGCACGC CCGAGCCGTT CCAGGTCACC ATGCGCCGCT TCGGCCGGAA GCTGGACGTG GAGCGGCTCG CGCCCGAGCT GCCGCTGACC GCGTTCTTCT TCGACGCGCT GGTGGCCGGC GGCGCGGAGC TGCTGGCGCG CCCCGAGCGC GAGCGCTGGG CCGCGCTCGC GCGGGCCATC CCGGCGGAGC GCCGCGTCCC GCGGCTCGTC ACCCGCGATC CCGCCGAGGC CCGCGCGTTC CTCGAGGACG CGCTCGCCCG CGGCCAGGAA GGCGTGGTGG CGAAGGCGCT CGACGCACCC TACGAGGCCG GCCGCCGCGG CGCCGCGTGG CTCAAGGTGA AGCGCGCGCA CACGCTCGAC CTCGTGGTGC TCGCCGCGGA GTGGGGGAGC GGCCGGCGCC GCGGCTGGCT CTCGAACCTG CACCTCGGCG CGCGCGACCC CGCCTCCGGC GGCTTCGTGA TGCTCGGGAA GACGTTCAAG GGCATGACCG ACGCCATGCT CGCGTGGCAG ACCGACCGGC TGAAGGCGCT CGCCACCGGG CCGCTCGACG CCTGGCAGGT CCCGGTGCGC CCGGAGCTGG TCGTGGAGGT CGCGTTCGAC GGGATCCAGT CCAGCCCCCG GTACCCCGGC GGCCTCGCCC TCCGCTTCGC GCGCGTGAAG CGCTACCGCG AGGACAAGCG CCCCGAGGAC GCGGACACGA TCGAGACGGT GCGGGGGCTG TACGGAGGGT GA
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Protein sequence | MLLAELAEVS RAVAATPARL EKIARLADAL GRLAPDERAV GASWLAGDLP GGRVGIGAAT LRAALEAAPP ERSGPGLTVA EVDAALRRIA AVAGPGSGAA RRRELDALLA RAGNPERRFL AALVLGELRQ GALEGVLADA VAKAAGLPAA EVRRAAMLAG ALPPVAEAAL SEGAAGLARF RLRVGEPVSP MLAQTAADVD EALRALGGEA ALEWKLDGAR IQAHRDGEAV RVFSRSLRDV TAAVPEVVAL LRAAPEPRLV LDGEAIALRA DGTPEPFQVT MRRFGRKLDV ERLAPELPLT AFFFDALVAG GAELLARPER ERWAALARAI PAERRVPRLV TRDPAEARAF LEDALARGQE GVVAKALDAP YEAGRRGAAW LKVKRAHTLD LVVLAAEWGS GRRRGWLSNL HLGARDPASG GFVMLGKTFK GMTDAMLAWQ TDRLKALATG PLDAWQVPVR PELVVEVAFD GIQSSPRYPG GLALRFARVK RYREDKRPED ADTIETVRGL YGG
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