Gene Adeh_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_3415 
Symbol 
ID3889423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp3929082 
End bp3930998 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content82% 
IMG OID637864970 
ProductTPR repeat-containing protein 
Protein accessionYP_466619 
Protein GI86159834 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCCG GCGAACGCGT CGCGCTGGAC CGGCTCTGGC CGATGCTGCT CGGGCTCGCG 
GCCCTGGTGG CGGGCGCGCT CGTGCTGGAG GCCTGGGCCG GCCGGCGCGG GAACGAGCCG
CTCCGCATCG CGGTGACCGA CGAGGCGCTG CCCGCGGGCG AGGAGGACGA GCCGTCCGGC
GACGCGCCCG AGGGCCCCGA GGCGCCGCCC GTCTCCGACG CCCACGCCCG CGCCCGCACC
GCCGCGCGCC GGGCGCTCTA CGCCGACGCG ATCCCGCTCT ACGAGCAGGC GCTGCGCGAC
CGCCCCGACG CCCCCGCGCT CGAGGCGGAG CTGGGCGCGT GGCTCCTCGC CGCCGGCCAG
CCCGAGCGCG CGCTGCCGCA CCTCGCCCGC GCCGACCAGC TCCGCCCGGA CCCGGGTACT
GCGCTCCGCC TCGGCCTGGC CCGGGCCCGC CTCGGGGACC GCGAGGGCGC CGAGCGGGAT
CTCCGCCGCG CGCTGGCCCA GCGGCCCTCG TCGGGCGCGG TCCGGATCGC GCTCGGGACG
CTGCTGCGCC GGCGCGGCGC GGTGGCCGAG GCGGTGGCGC TGCTCGAGCC CGCCGCGGCG
GCGGGCTCGA ACGAGGAACG CGCGCGGGCG CTCGTGGCGC TCGGCGCGGC GCACCTCGCC
GCCGGGCGAC GCGCCGAGGC GACGCGCGCC TTCGACCAGG CGGTGCTCTA CGCGCCTGCC
CGCGTCGAGA TCCGCCTGGG CGTGGCCCGC GCCTGGCTGG GCGGCGACGC CGGCGACGCG
GATCGGGCGC TCGCGGTGCT GGCCCGCGCC GCCGACCTCG CGCCCGACGT GCCGGCCGTG
CACGCGGCGC TGGGGCGCGC CCGCGAGCGG ACCGGGGACG GCGCCGGCGC GGCCGAGGCC
TACGAGCGCG CGCTCCGGCT CGACCCCTCG AACCGGTACT CCCGCCGCCG CGTGCTGCGC
CTCGCGCTCG CGGCCCGCGA CTTCGCGCGG GCCCGGCACG AGGCCGACCG GCTGGTGACC
GACGGGCCGG AGGTGGCCGA GCACCACTTC CTCGCCGCGC TGGTGGCGGA CCGCGACGGC
CGCCCGGCGG ACGCGCGCCG CGCCTACCGG CGCGCCATCG AGGTCGCGAA GGGCGACTAC
CCCGAGGCCT GGCTCAACCT GGGCGTGCTG GAGAAGGGCG AGGGCGACCT CGCCGCGGCC
CGCGCCGCCT ACCGGCGCGC GCTGGAGCTG CGGCCCGGCT ACGGTGCGGC GCTCGTGAAC
CTCGGCAAGC TGGAGGAGGC GGCCGGCGAC GCCGCGGCGG CGGAGGCCGC CTACCGGCGC
GCGGTGGAGC TCGACCCGCG CCACGCGCCG GGCTGGCTCG CGCTCGGCCA GCTCCAGTCC
GACGCCCGCC GCTTCGACGA GGCGGTCGCG TCGCTCCGCC GCGCGCTCGA GGCGCGCCCC
GGCTACGACG CCGCCGAGCT GTCGCTGGGC GTCACCGCCG CGCGCGCGGG GCGCACCGCC
GAGGCCATCG CCGCCTACCG CCGCGTGCTG GCCCGCTCGC CGCGCTCCGC CACCGCCTGG
TACGACCTCG GCCTGGCGCT GCTCGACGCG GGCGACCCGC GCCAGGCGGG CGACGCGTTC
CGCCAGGCCG CCGCGATCGA CCCGGACCAC GTGCCGTCGC GGCGCAAGAC GGCCGAGCTG
GAGCTCGGCT CCGGCCGCGT GGCCGAGGCC CGGGCACGCT TCGAGGAGCT GCTCGACCTC
GTCCCCGGCG ACCGCGCGGC CCGCGCCGCG CTCGCCGAGG TCGCCGCCCG CCAGGGCGAC
CGCGCCGGCT GCGAGGCCCG GGCGCGGGCG CTGCTCGCCG AGGCGCCCGG CGATCCCGCC
GTGCAGCCGC TGCTCGCGCG CTGCGCCACC CTCGCCCCGC GCGCCGCGGC CCGCTGA
 
Protein sequence
MSAGERVALD RLWPMLLGLA ALVAGALVLE AWAGRRGNEP LRIAVTDEAL PAGEEDEPSG 
DAPEGPEAPP VSDAHARART AARRALYADA IPLYEQALRD RPDAPALEAE LGAWLLAAGQ
PERALPHLAR ADQLRPDPGT ALRLGLARAR LGDREGAERD LRRALAQRPS SGAVRIALGT
LLRRRGAVAE AVALLEPAAA AGSNEERARA LVALGAAHLA AGRRAEATRA FDQAVLYAPA
RVEIRLGVAR AWLGGDAGDA DRALAVLARA ADLAPDVPAV HAALGRARER TGDGAGAAEA
YERALRLDPS NRYSRRRVLR LALAARDFAR ARHEADRLVT DGPEVAEHHF LAALVADRDG
RPADARRAYR RAIEVAKGDY PEAWLNLGVL EKGEGDLAAA RAAYRRALEL RPGYGAALVN
LGKLEEAAGD AAAAEAAYRR AVELDPRHAP GWLALGQLQS DARRFDEAVA SLRRALEARP
GYDAAELSLG VTAARAGRTA EAIAAYRRVL ARSPRSATAW YDLGLALLDA GDPRQAGDAF
RQAAAIDPDH VPSRRKTAEL ELGSGRVAEA RARFEELLDL VPGDRAARAA LAEVAARQGD
RAGCEARARA LLAEAPGDPA VQPLLARCAT LAPRAAAR