Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3415 |
Symbol | |
ID | 3889423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 3929082 |
End bp | 3930998 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | 637864970 |
Product | TPR repeat-containing protein |
Protein accession | YP_466619 |
Protein GI | 86159834 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.241751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCCG GCGAACGCGT CGCGCTGGAC CGGCTCTGGC CGATGCTGCT CGGGCTCGCG GCCCTGGTGG CGGGCGCGCT CGTGCTGGAG GCCTGGGCCG GCCGGCGCGG GAACGAGCCG CTCCGCATCG CGGTGACCGA CGAGGCGCTG CCCGCGGGCG AGGAGGACGA GCCGTCCGGC GACGCGCCCG AGGGCCCCGA GGCGCCGCCC GTCTCCGACG CCCACGCCCG CGCCCGCACC GCCGCGCGCC GGGCGCTCTA CGCCGACGCG ATCCCGCTCT ACGAGCAGGC GCTGCGCGAC CGCCCCGACG CCCCCGCGCT CGAGGCGGAG CTGGGCGCGT GGCTCCTCGC CGCCGGCCAG CCCGAGCGCG CGCTGCCGCA CCTCGCCCGC GCCGACCAGC TCCGCCCGGA CCCGGGTACT GCGCTCCGCC TCGGCCTGGC CCGGGCCCGC CTCGGGGACC GCGAGGGCGC CGAGCGGGAT CTCCGCCGCG CGCTGGCCCA GCGGCCCTCG TCGGGCGCGG TCCGGATCGC GCTCGGGACG CTGCTGCGCC GGCGCGGCGC GGTGGCCGAG GCGGTGGCGC TGCTCGAGCC CGCCGCGGCG GCGGGCTCGA ACGAGGAACG CGCGCGGGCG CTCGTGGCGC TCGGCGCGGC GCACCTCGCC GCCGGGCGAC GCGCCGAGGC GACGCGCGCC TTCGACCAGG CGGTGCTCTA CGCGCCTGCC CGCGTCGAGA TCCGCCTGGG CGTGGCCCGC GCCTGGCTGG GCGGCGACGC CGGCGACGCG GATCGGGCGC TCGCGGTGCT GGCCCGCGCC GCCGACCTCG CGCCCGACGT GCCGGCCGTG CACGCGGCGC TGGGGCGCGC CCGCGAGCGG ACCGGGGACG GCGCCGGCGC GGCCGAGGCC TACGAGCGCG CGCTCCGGCT CGACCCCTCG AACCGGTACT CCCGCCGCCG CGTGCTGCGC CTCGCGCTCG CGGCCCGCGA CTTCGCGCGG GCCCGGCACG AGGCCGACCG GCTGGTGACC GACGGGCCGG AGGTGGCCGA GCACCACTTC CTCGCCGCGC TGGTGGCGGA CCGCGACGGC CGCCCGGCGG ACGCGCGCCG CGCCTACCGG CGCGCCATCG AGGTCGCGAA GGGCGACTAC CCCGAGGCCT GGCTCAACCT GGGCGTGCTG GAGAAGGGCG AGGGCGACCT CGCCGCGGCC CGCGCCGCCT ACCGGCGCGC GCTGGAGCTG CGGCCCGGCT ACGGTGCGGC GCTCGTGAAC CTCGGCAAGC TGGAGGAGGC GGCCGGCGAC GCCGCGGCGG CGGAGGCCGC CTACCGGCGC GCGGTGGAGC TCGACCCGCG CCACGCGCCG GGCTGGCTCG CGCTCGGCCA GCTCCAGTCC GACGCCCGCC GCTTCGACGA GGCGGTCGCG TCGCTCCGCC GCGCGCTCGA GGCGCGCCCC GGCTACGACG CCGCCGAGCT GTCGCTGGGC GTCACCGCCG CGCGCGCGGG GCGCACCGCC GAGGCCATCG CCGCCTACCG CCGCGTGCTG GCCCGCTCGC CGCGCTCCGC CACCGCCTGG TACGACCTCG GCCTGGCGCT GCTCGACGCG GGCGACCCGC GCCAGGCGGG CGACGCGTTC CGCCAGGCCG CCGCGATCGA CCCGGACCAC GTGCCGTCGC GGCGCAAGAC GGCCGAGCTG GAGCTCGGCT CCGGCCGCGT GGCCGAGGCC CGGGCACGCT TCGAGGAGCT GCTCGACCTC GTCCCCGGCG ACCGCGCGGC CCGCGCCGCG CTCGCCGAGG TCGCCGCCCG CCAGGGCGAC CGCGCCGGCT GCGAGGCCCG GGCGCGGGCG CTGCTCGCCG AGGCGCCCGG CGATCCCGCC GTGCAGCCGC TGCTCGCGCG CTGCGCCACC CTCGCCCCGC GCGCCGCGGC CCGCTGA
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Protein sequence | MSAGERVALD RLWPMLLGLA ALVAGALVLE AWAGRRGNEP LRIAVTDEAL PAGEEDEPSG DAPEGPEAPP VSDAHARART AARRALYADA IPLYEQALRD RPDAPALEAE LGAWLLAAGQ PERALPHLAR ADQLRPDPGT ALRLGLARAR LGDREGAERD LRRALAQRPS SGAVRIALGT LLRRRGAVAE AVALLEPAAA AGSNEERARA LVALGAAHLA AGRRAEATRA FDQAVLYAPA RVEIRLGVAR AWLGGDAGDA DRALAVLARA ADLAPDVPAV HAALGRARER TGDGAGAAEA YERALRLDPS NRYSRRRVLR LALAARDFAR ARHEADRLVT DGPEVAEHHF LAALVADRDG RPADARRAYR RAIEVAKGDY PEAWLNLGVL EKGEGDLAAA RAAYRRALEL RPGYGAALVN LGKLEEAAGD AAAAEAAYRR AVELDPRHAP GWLALGQLQS DARRFDEAVA SLRRALEARP GYDAAELSLG VTAARAGRTA EAIAAYRRVL ARSPRSATAW YDLGLALLDA GDPRQAGDAF RQAAAIDPDH VPSRRKTAEL ELGSGRVAEA RARFEELLDL VPGDRAARAA LAEVAARQGD RAGCEARARA LLAEAPGDPA VQPLLARCAT LAPRAAAR
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