Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3412 |
Symbol | |
ID | 3889420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 3925176 |
End bp | 3926507 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | 637864967 |
Product | secretion protein HlyD |
Protein accession | YP_466616 |
Protein GI | 86159831 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0866166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGGC GGGTGGCAGC GGCACCGCGG CGCTGGGCGC GCGCCCGACG CCGGTGTACC AATGGGGACA TGGACGCCCC CGCGAGCCCG CGCCGCGCCG TCGCGACCCT GCTCCGGTCT CGCGCCGGCC GCGCCGCGGT CGGGATCGTG CTGGTGCTCG CGGCGGTGGC CGCGGTGCGC GCGGCGCGCG GGACGGCCGC GCCCGGCTAC GCGGTGGAGC GGCGGCCGCT GGTGCAGCGG GTGGTGGCGA GCGGTCGGGT GATGGCGCCG GCGCGCATCC AGGTGGGCGC GGTCGCGACC GGCAAGGTGG CCGCGGTCCG GGTGGACGAG GGTGACGCGG TCCGCGCCGG CGACCTGCTG GTCCGGCTCG ACGACGCCGA GGCCCGCGCC GCGCTCTCGC AGGCGCGCGC ACAGGTGCTC CAGGCGGCGG CGCGGCTCGA GCAGTCGCGG GGCCCGGCGG CGCGCGGCGC GACCGAGGCG CTGCGCCAGG CCGAGCTGCG GGTGGAGCTG GCGGAGCGCG CGCGGGAGCG GGCGCGGAGC CTGGCCGACG CGGGGAGCGC CAGCGTCGCG CAGCTGGACG ACGCGGAGCA GGCGCTCGCG CTGGCCCGGA GCGCGCGGGA GAGCGCGCTC GCGCAGGCGG CCGCGGCCGC CGGCGCCGGC CCGGACCAGC GCCTGGCGGA GGCCGCGCTC GCGGCGGCCC GCGGCGCCGA GGAGGTGGCC CGCGCGCGGC TGGAGGACCG GCAGCTCCGC GCGCCGGCCG CGGCGACGGT GATCCTGCGC GAGGTCGAGC CCGGCGACAC CGTCACCGCG GGCGCGCGGC TGCTCGTCCT GGCGCGCGCC GGCGAGACGC GGCTCTCGGT CGAGCCGGAC GAGAAGAACC TGGCGCTGCT GCGCGTCGGC CAGCCGGCCC GCGCGGTGGC GGACGCGTTC CCGGACGCGC CCTTCGAGGC GACGGTGTCC TTCCTCGCGC CCTCGGTGGA TCCCGCCCGC GGCACGGTCG AGGTGCGCCT CGCCGTCCCC GCGCCGCCGC CGTTCCTGCG CCCCGACATG ACCGTCTCGG TGAACGTTGA GGTGGGCCGC AAGGCCGACG CGCTCGTCGT CCCGGCGGAC GCCGTCCGCG ACGCCGGCGG CTCGCCCTGG GTGCTGGCGG TCCGCGGCGG CCGGGCGGAG CGGCGCGCGG TGCGCCTCGG GCTCCGCGGC GACGGGCTGG TGGAGATCGC CGGCGGGCTC GCCGCGGGCG ACGAGGTGCT GGCGCCGTCC GCCGCGGTGG TGGAGGGGGG CCGGGTGCGG GTGCGCCGCC TGCCGGGGCC GGAGCTGGGC CGTGCCCTTT GA
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Protein sequence | MSRRVAAAPR RWARARRRCT NGDMDAPASP RRAVATLLRS RAGRAAVGIV LVLAAVAAVR AARGTAAPGY AVERRPLVQR VVASGRVMAP ARIQVGAVAT GKVAAVRVDE GDAVRAGDLL VRLDDAEARA ALSQARAQVL QAAARLEQSR GPAARGATEA LRQAELRVEL AERARERARS LADAGSASVA QLDDAEQALA LARSARESAL AQAAAAAGAG PDQRLAEAAL AAARGAEEVA RARLEDRQLR APAAATVILR EVEPGDTVTA GARLLVLARA GETRLSVEPD EKNLALLRVG QPARAVADAF PDAPFEATVS FLAPSVDPAR GTVEVRLAVP APPPFLRPDM TVSVNVEVGR KADALVVPAD AVRDAGGSPW VLAVRGGRAE RRAVRLGLRG DGLVEIAGGL AAGDEVLAPS AAVVEGGRVR VRRLPGPELG RAL
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