| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2825 |
|---|
| Symbol | |
|---|
| ID | 3890172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3202469 |
|---|
| End bp | 3203821 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637864375 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_466032 |
|---|
| Protein GI | 86159247 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCTCG CCGACCGCCT CAAGCAGCGC GCGAACGAGC CCGCCGCCTC CCACGCGATG
GTGGCGGAGA CCGCGCCGCA GGACTTCCAC GACCTGAAGG GCGAGCTCCA CCGCCGCATC
GTGGACGCGC TCGACCTGCA GGCCTTCGAG AAGCTCGCCC CGGAGCGGCG CCAGGACGAG
CTGCGCAACG TGCTCGCCGG CGAGATCGCG CGGCGGGAGC TCCCGCTCAA CCAGATCGAG
CGCGAGCGGA TGGTGCAGGA ACTGCTGGAC GAGCTCACCG GCCTCGGGCC GCTGGAGCCG
CTGCTCGCCG ACCCCACCAT CTCCGACATC CTGGTGAACA CCTACGCGAC CGTCTACATC
GAGCGCGGCG GCCGGCTCGA GCTCACCCCG GTGCGCTTCG CCGACAACCA GCACCTGATG
CAGATCATCA ACCGGATCGT GTCGCGCATC GGCCGCCGGG TGGACGAGAC GTCGCCGATG
GTGGACGCGC GCCTCCCCGA CGGCTCGCGC GTGAACGCGA TCATCCCGCC GCTCGCGCTC
GACGGCCCCA TCGTGTCCAT CCGGCGCTTC GGCGTGACGC CGCTCCGGAT GCGGGACCTG
CTCGCCGGCG GCGCGCTGAG TACGGAGGCC GGCGGCTTCC TGGGGGCGTG CGTCGAGGCG
AAGCTCAACA TCCTCATCAG CGGCGGCACC GGCGCGGGCA AGACCACGCT GCTCAACGCG
CTCTCCGCCT TCATCCCGGA CGACCAGCGC ATCGTCACCA TCGAGGACTC GGCCGAGCTC
CAGCTCCAGC AGCGCCACGT GGTCCGCCTC GAGACCCGTC CGCCCAACAT CGAGGGCAAG
GGCGAGATCC TCGCGCGCGA CCTGGTCAAG AACGCGCTCC GCATGCGCCC CGACCGCATC
GTGGTGGGCG AGGTCCGCGG CGGCGAGGTC CTCGACATGC TCCAGGCCAT GAACACCGGC
CACGAGGGCT CGATGACCAC CGTGCACGCG AACACGCCCC GCGACGCCCT GGCGCGCCTC
GAGGCGATGA TCGGCATGAG CGGCGTGCCG CTCTCCGAGG GCGCCACGCG GGCGACCATC
TCGCGCGGCC TCAACGTCAT CGTCCAGCTC AACCGCGGCA CGGACGGTCG CCGCCGCATC
ACCAGCATCG CCGAGATCAC CGGGACCGAG GGCGCGGCGA TCACGATGCA GGACGTGTTC
CGGTTCGAGC AGCACGGCGT GGACGCGACC GGGAAGATCC TGGGCGAGTT CAGGCCCACC
GGCATCCGGC CGCGCGCCCT CACGCGCATC GCGCAGTTCG GCGTCGATCC GGGCCGCATC
ATCGAGCGGC TCCAGGGGCC GGCCCATGCG TGA
|
|---|
| Protein sequence | MGLADRLKQR ANEPAASHAM VAETAPQDFH DLKGELHRRI VDALDLQAFE KLAPERRQDE
LRNVLAGEIA RRELPLNQIE RERMVQELLD ELTGLGPLEP LLADPTISDI LVNTYATVYI
ERGGRLELTP VRFADNQHLM QIINRIVSRI GRRVDETSPM VDARLPDGSR VNAIIPPLAL
DGPIVSIRRF GVTPLRMRDL LAGGALSTEA GGFLGACVEA KLNILISGGT GAGKTTLLNA
LSAFIPDDQR IVTIEDSAEL QLQQRHVVRL ETRPPNIEGK GEILARDLVK NALRMRPDRI
VVGEVRGGEV LDMLQAMNTG HEGSMTTVHA NTPRDALARL EAMIGMSGVP LSEGATRATI
SRGLNVIVQL NRGTDGRRRI TSIAEITGTE GAAITMQDVF RFEQHGVDAT GKILGEFRPT
GIRPRALTRI AQFGVDPGRI IERLQGPAHA
|
|---|
| |