| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2540 |
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| Symbol | |
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| ID | 3890141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | - |
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| Start bp | 2869088 |
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| End bp | 2870929 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637864080 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_465747 |
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| Protein GI | 86158962 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.712905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGCT CCTGGTACTG GCGCGTCGCG CTCGTCGTCG CGGTCGCGAT CCTGTCGATC
TACCAGCTCG TCCCGAGCTG GTTCTACTTC AAGCTCCCGC CCGACCAGCG GAACACCGAG
GCGTACGACA CCTCGGTGCC GGGCTGGGCG CCGGACGCGA AGCACCACCT CAACCTCGGC
CTGGACCTCC AGGGCGGCAT CCTGCTCTCC ATGGGCGTGG ACGTCGATCG CGCGGTCAAG
ACCAAGGTCG CCCGCCGCGC CGACGAGATC GGCGAGTTCC TCAAGGGCAA GAACGTCGCG
TTCACCGGCA CGAAGGTGGT CGGCGGCGGC GCGCAGGTCG AGGTGAGCGC CGCGAACCCG
GGCGAGGTGA AGGACGCGGT GCTCGGCTCG ACCGGCTACT CGGAGGAGAT GTACTCGCCG
GGTGGCGCGC CGGACGGCGC GGTCCGCTTC GCCTTCAAGG ACTCGGTGCT CCGCGACTTC
CGCGAGAAGG CGGTGAAGCA GGCGGAGAAG GTGATCCGCA ACCGCGTGGA CAAGTGGGGC
GTCACCGAGC CCGACATCAA GACCAAGGCC AACAACCAGA TCCAGGTCCA GCTCCCGGGC
TTCAAGGATC CGGAGAAGGC CAAGGAGCTG CTGGGCCGCA CCGCGCAGCT CGAGTTCAAG
ATCGCCGACG ACGAGAACCC GGTCCTCGAC CAGGTCCGCA CGCAGCTCCC GCAGTGCCAG
GGCGACCGCC AGGGGCTGTC GCTCCCGCTG CCCGAGAGCG GCTGCTGGAC GGTGGAGCCG
GTCGAGCTGC CGAGCGGCGG CTCGCGCGCG GCGACCATGG TGGCGGCGAA CACCCGCACC
GAGCTCGAGA AGGTGATCAC GGAGAAGCTG AACCCGCTGC TCGACCCGCA GAAGAACGTG
GTGGGCATCG GCGAGGGCCA GGTCGGCCAG GGCCCCATCA AGACCACCTA CTACCGGACC
TACCTGCTCC GCGCGAAGAC CGAGCTGACC GGCGACTACA TCGCCGACGC GGCGGTGGCG
ATCGACCAGT CCGACACGCT GCAGCGCGGC CGCCCGGTGG TGTCCTTCAA GATGTCGCCC
GAGGGCGCGC GGCTGATGGA CAAGCTCACC AGCGAGAACA TGCGGCGCCG GATGGCGACC
GTGCTCGACG ACAAGGTCGA GACCGCGCCC TACATCCAGG GCCGCATCTC CTCGAACGGC
CAGATCACGC TGGGCTCGGG CCGCAACCAG CAGGACATGT TCGACGAGGC GAACGGCATC
GCGCTGGTGC TGAAGGCCGG CGCGCTCCCC GCCCCGGTGA CCATCACCGA GGAGCGGACC
GTGGGCGCCA CCCTCGGGCC GGAGCTGGTG CGCAAGGGCA CGCTCGCGGC GCTGGTCGGG
CTCGCGCTGG TGGTCGTGTT CATGGTCGTC TACTACCGCG GCACCGGCCT GGTGGCCGAC
GTGGCGCTGG CGCTGAACGG CCTGCTGGTG CTGGCGGTCA TGTCGATGAT CGGCACCACG
CTGACGCTGC CGGGCATCGC CGGGTTCGTG CTCACGCTCG GCATGGCGGT GGACGCGAAC
GTGCTCATCA ACGAGCGCAT CCGCGAGGAG ATGCGCGCCG GGCGCAACGT GCGGCAGTCG
GTGCAGCTCG GCTACGACCG CGTGTTCTGG ACCATCGTGG ACTCGCACGT GACCACGCTG
GTCGCCGGCG TGGTGCTGTT CCAGTACGGG TCGGGGCCGA TCCGCGGCTT CGCGGTGACG
CTGATCATCG GCCTGGTCGC CTCGATGTTC ACGTCGATCG TGGTGACCCG GGTGATCATG
GAGTACTTCA CGCGCCACGA CACGGCGCGC CTGAGCGTCT GA
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| Protein sequence | MERSWYWRVA LVVAVAILSI YQLVPSWFYF KLPPDQRNTE AYDTSVPGWA PDAKHHLNLG
LDLQGGILLS MGVDVDRAVK TKVARRADEI GEFLKGKNVA FTGTKVVGGG AQVEVSAANP
GEVKDAVLGS TGYSEEMYSP GGAPDGAVRF AFKDSVLRDF REKAVKQAEK VIRNRVDKWG
VTEPDIKTKA NNQIQVQLPG FKDPEKAKEL LGRTAQLEFK IADDENPVLD QVRTQLPQCQ
GDRQGLSLPL PESGCWTVEP VELPSGGSRA ATMVAANTRT ELEKVITEKL NPLLDPQKNV
VGIGEGQVGQ GPIKTTYYRT YLLRAKTELT GDYIADAAVA IDQSDTLQRG RPVVSFKMSP
EGARLMDKLT SENMRRRMAT VLDDKVETAP YIQGRISSNG QITLGSGRNQ QDMFDEANGI
ALVLKAGALP APVTITEERT VGATLGPELV RKGTLAALVG LALVVVFMVV YYRGTGLVAD
VALALNGLLV LAVMSMIGTT LTLPGIAGFV LTLGMAVDAN VLINERIREE MRAGRNVRQS
VQLGYDRVFW TIVDSHVTTL VAGVVLFQYG SGPIRGFAVT LIIGLVASMF TSIVVTRVIM
EYFTRHDTAR LSV
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