| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2327 |
|---|
| Symbol | |
|---|
| ID | 3889755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 2624845 |
|---|
| End bp | 2627985 |
|---|
| Gene Length | 3141 bp |
|---|
| Protein Length | 1046 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637863865 |
|---|
| Product | HsdR family type I site-specific deoxyribonuclease |
|---|
| Protein accession | YP_465534 |
|---|
| Protein GI | 86158749 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.279582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA ACGCCTACAG CGAACTGGCA CTTGTCGAAG CGGCGGCGAT GGACGTCCTC
GCCGCGCTTC AGTGGTCGGC AGCATCGGGG GCGGACGAGG TATTTGGCTC ATCAGGTACG
CTCGGGCGCG AGTCCGATCG CGACGTGGCG CTAGTGCGTC GCCTCCGTCA TGCGCTAGCG
AAGCTGAACC CGGGAACACC GCCCTCAGGA GTGGACACCG CCATCGACGA ACTGCTTCGT
GACCGTACGG CGATGGATCC GGCAGGCGCG AATCGCGAGG TGCATCGTCT CCTGAGCGAG
GGGGTGAAGG TCACCGTGCG GGACCCGCGC ACCGGCCAGA ATGAACTGCG CACGGTGCGG
GTCGTCGACT GGGACCACCC GACGGAGAAT GACTTCCTCG CGGTCGAGCA GTTCGCAGTT
AGGGGTGCCC TCTATAAATG TATCCCGGAT ATCGTTCTGT TCGTGAACGG TCTCCCACTC
GTGGTAATTG AGTTGAAGAA GCCGGGCGTT CCAACTCGCC AAGCGTTTGA TGAGAACCTC
ACAAGCTACA AACACGCTCA GAACGGGGTT CCGCAGCTGT TTGCGTTCAA CGCGCTCCTG
ATCGCGTCCA ACGGAACTGA AGCGAAAGTA GGCTCGCTGA CCGCGGACTG GGGTCGCTTC
TTCGATTGGA AGCGGGTCGA CCGTGAGGAC GAACCGAGGC GCATCTCGAT GGAGGTTCTG
CTGCGTGGAA CGTGCGAGAA GGGACGCCTC TTGGACCTCG TTCGTAACTT CTCGCTCTTC
TCCGAGCACA AGACGGGCCT CACGAAGATT CTCGCTCAGA ACCATCAGTT CCTTGGCGTG
AACAACGCCA TCGCGGCGAC GCTGAAGGCT CGGCAGGAGG GGCACGGGCG CGGCGGCGTG
TTCTGGCAGA CGCAGGGCAG CGGCAAGAGC TTCTCGATGG TCTTCTACGC GCAAAAGATT
TTGCGCACGG TCCCTGGAAA CTGGACGTTC GTTGTCGTCA CGGACCGGGT GGAACTGGAC
GACCAGATCG CGAAGACGTT CGCTGCGTGC GGAGCAGTGG AGGACGCTGC GGCGTGCCAT
GCGACCACGG GTGAGAACCT CCGCGACTTG CTCCGCGGTA ACCACCGTTA CGTCTTCACT
CTCATCCACA AATTCCAGAC GATGGAGGTC TTGAACGATC GTCGGGAGAT CATCGTAATC
GTCGACGAGG CCCACCGGAC CCAGTACGAC CAACTTGCGA TGAACATGCG CGCGGCGCTG
CCGAACGCGA TGTTCGTTGC GTTCACCGGC ACGCCGTTGA TTGCTACTGA GGAAAAGACA
AGAGAGGTCT TTGGCGACTA CGTCTCCATT TACGACTTCC AGCAGTCGAT TGAGGACGGG
GCTACCGTCC GCCTCTTCTA CGAGAACCGG ACGCCCGAAC TGCGGCTCGC GAACCCCGAC
CTGAACGACG AGTTGTATGA CGTCATCGAC GCCGCCGCTC TTGACGCGGA GAACGAGGCG
CGCCTCCAGA AACTCCTCGG ACAGAAGTAC CATCTCATTA CTCGGGACGA CCGGCTCGAC
ACGGTCGCTA AGGACATCGT CCAGCACTTC CTCGCTCGCG GCTTCCAGGG GAAGGCGATG
GTCGTCTCAA TCGACAAGGC GACCGCAATT CGGACGCACG ATAAGGTGCG ACGTGAGTGG
GATGCCGAGC GCGAGCGAGT GAAAGCTGCA CTCCGGGACT ACGAGAAGGC CCCGGAGGAG
CAGGCGCGGT TGTCAGACCG CCTGAAGCGG CTCGACACGG TCGATATGGC CGTCATCGTG
TCGCCGGGCC AGAACGAGAT CGAGGAGATG CAGAAGCTCG GGCTCGATAT CGTTCCGCAC
CGGACGCGGA TGGTCCAGTC GCAGCCGTCC CTTGACGAAA AGTTCAAAGA CCCCGAGGAC
CCGCTCGCTC TCGTTTTTGT TTGCGCGATG TGGCTCACAG GGTTCGACGC GCCGAGCTGC
TCGACAGTCT ACCTGGACAA GCCGATGCGG AACCACACCC TGATGCAGAC GATCGCGAGG
GCGAACCGCG TCTACCCCGG TAAGCACAGC GGCGTCATCG TGGACTACGC GAACGTCTTT
CAGTCGCTGG AGAAGGCGCT AGCCATCTAT GGTGCAGGCA CCGGCGGCCG GACGCCTGTC
CGCGACAAGG AGGACCTCGT TGACGAGCTA CGCTCTGCGC TAGCGGCGCT GGACGCCTTC
TGCAAGTCGG CGCGGGTGAG CCTGTCTGGC ATCGAGGAGA GTCACAACGC CATCGAGAGG
CTCACACGGG TTGGGGAGGC GGTGAACGCG CTCCTGTCCC CGGACGACCG TAGGAAGGGC
TTCCAGGCGC AGGGCCGGCT TGTGAGTGCC CTGTACAGCG CCGTGAAGCC CCACAGGCGC
GCAGTGGAGT TCGCGGTTCG GATGGCGACA GTCGAAGCGC TCGTGGACAA GATTCGCGCC
GAACTGTCGC CTGAGAAGGT GGACCTCGCT GACGTTCTTC AGCGAGTAGG GGAGGTACTC
GACCGTTCCA TCCGTGGCGC GGAGATCGCT GAAGGCGGGC CCCCTCCGAT CGACCTCTCA
CGCATCGACT TCCAGGTGCT CGCGGAACGA TTCAGGCAGT CGAAGACGCG GAACCTGGAC
CTGGAACGGC TCAAAGCCGC GATCGCAGCG CAACTCGAAC GGCTGATCGA CGAGAACGAG
ACGCGTGTCG ACCTGCGCGA ACGCTTCGAG AGCCTCATCG AGGAGTACAA CATCGGGTCC
AAGCAGATCG AGCAGCTCTT TCAGGAGTTG CTGGACCTGA GTCAGAAACT CTCGGAGGAG
GAGAAGCGTC ACATCCGGGA GCAGCTTTCG GAAGAGGAGT TGGTCGTCTT CGACCTTCTC
ACGCGGCCCG GCCCCGAGTT GTCGCCGCCG GAGCGCGACG AGGTGAAGAA GGTCGCGAGG
CAACTGCTGG GGACGGTCAG GGGAATTCTC ACGATCGACT GGCAGAAGAC CGCTCAGTCC
CGCGCCCGGG TTCGCGTCGC GATCGAGGAT GCGCTCGATA CGGGCTTGCC AGCCTCGTAC
ACGAAGGACC TCTTCATGGA GAAAGCCGGT GCCATCTTCA GGCACGTCTA CCGGCACTAC
GGTGAGGCGT TCGCTGCCTA G
|
|---|
| Protein sequence | MTANAYSELA LVEAAAMDVL AALQWSAASG ADEVFGSSGT LGRESDRDVA LVRRLRHALA
KLNPGTPPSG VDTAIDELLR DRTAMDPAGA NREVHRLLSE GVKVTVRDPR TGQNELRTVR
VVDWDHPTEN DFLAVEQFAV RGALYKCIPD IVLFVNGLPL VVIELKKPGV PTRQAFDENL
TSYKHAQNGV PQLFAFNALL IASNGTEAKV GSLTADWGRF FDWKRVDRED EPRRISMEVL
LRGTCEKGRL LDLVRNFSLF SEHKTGLTKI LAQNHQFLGV NNAIAATLKA RQEGHGRGGV
FWQTQGSGKS FSMVFYAQKI LRTVPGNWTF VVVTDRVELD DQIAKTFAAC GAVEDAAACH
ATTGENLRDL LRGNHRYVFT LIHKFQTMEV LNDRREIIVI VDEAHRTQYD QLAMNMRAAL
PNAMFVAFTG TPLIATEEKT REVFGDYVSI YDFQQSIEDG ATVRLFYENR TPELRLANPD
LNDELYDVID AAALDAENEA RLQKLLGQKY HLITRDDRLD TVAKDIVQHF LARGFQGKAM
VVSIDKATAI RTHDKVRREW DAERERVKAA LRDYEKAPEE QARLSDRLKR LDTVDMAVIV
SPGQNEIEEM QKLGLDIVPH RTRMVQSQPS LDEKFKDPED PLALVFVCAM WLTGFDAPSC
STVYLDKPMR NHTLMQTIAR ANRVYPGKHS GVIVDYANVF QSLEKALAIY GAGTGGRTPV
RDKEDLVDEL RSALAALDAF CKSARVSLSG IEESHNAIER LTRVGEAVNA LLSPDDRRKG
FQAQGRLVSA LYSAVKPHRR AVEFAVRMAT VEALVDKIRA ELSPEKVDLA DVLQRVGEVL
DRSIRGAEIA EGGPPPIDLS RIDFQVLAER FRQSKTRNLD LERLKAAIAA QLERLIDENE
TRVDLRERFE SLIEEYNIGS KQIEQLFQEL LDLSQKLSEE EKRHIREQLS EEELVVFDLL
TRPGPELSPP ERDEVKKVAR QLLGTVRGIL TIDWQKTAQS RARVRVAIED ALDTGLPASY
TKDLFMEKAG AIFRHVYRHY GEAFAA
|
|---|
| |