| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2199 |
|---|
| Symbol | |
|---|
| ID | 3889550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 2477286 |
|---|
| End bp | 2478905 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 637863737 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_465406 |
|---|
| Protein GI | 86158621 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0323008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC CTGGCGACGG CGGCGGGCCG GACCTCGATC CGGCCGACCT CGCGGCGGCG
CTCCGCGTGC TGGCGCGGGT GGCCGAGGAC CGCACCGTGC TCGCGCGCGT GGACGCGGAC
GCGCGCGTGG CGCTGCAGCG GCTGGCCGGC GAGGTGGCGC GGCCGGACCT GAAGGCCCGC
AAGAAGCTGC AGAAGGCCCT GCTCAAGGAG GAGCACCGCG CGCGCCGGTC GCGGGACGCG
GACCTGCGCC GGGACACCGG CATCCAGCGG CTCCGGCAGG CGCCGGTGTT CGTGGCGCCG
CTCCCCGCGC TGCCGCCGCC AGGCGCCGAC GCGTCCGGCT GGTGGCCGCG CCTGCCCGGC
GCGGGCGAGG GCGGCGCCGG GGCAGGGGCG GGCGCGCCGG GCGCCGAGGA GAACACCGGG
CCGGAGCTGT CGGAGCCGCG CAAGTGCTAC GTGTGCAAGG CGACGTTCCG CCGCCTGCAC
CCGTTCTACG ATCAGCTGTG CCGCGCCTGC GGGGACGAGA ACCAGGCGCG CCGCACCGCC
GGCGCGGACC TGCGGGGCCG GGTGGCGCTC GTGACCGGCG CGCGCGTGAA GATCGGCTAC
CAGGCGGCGC TGCTGCTGCT CCGCGCCGGG TGCAGCGTGG TGGCGCTGAC CCGGTTCCCG
CGCGACGCCG CGGCGCGCTA CGCGCGCGAG GCGGACTTCG AGCGCTGGCG GGACCGGCTC
TCGATCCACG GCGTGGACCT GCGCCACACC CCCAGCGTCG AGCTGCTCTG CCAGCGGCTC
GAGGCGACGC TGCCGCGGCT CGACTTCCAG CTCCACAACG CCTGCCAGAC GGTGCGGCGG
CCCCCGGGGT TCTACGCGCA CCTGCTCGAG GCCGAGCAGG CGCCGCCGTC CGCGCTGCCG
CCGGCCGAGC GCGCGCTGCT GCGCGACTGG GAGGCGTTCC GGGACGCGCT CCGCGGCCAG
GGCGGCGCGG CGGGCGTGAC CGGGCCCGCG CTGCTCTCGC AGGCGCGCAG CGACGCGGAC
CTGCTCCTGC CGGGGAGGAG CGCGCTGGAG CTGTTCCCGC GCGGCGTGCT CGACCAGGAC
CTGCAGCAGG TGGACCTGCG CGCGCACAAC TCGTGGCGCC TGCGCCTGCA CGAGGTGCCC
ACCCTGGAGC TGCTGGAGGT GCTGCTGGTG AACGCGACGG CGCCGTTCGT GATGGCGTCG
CGGCTGAAGC CGCTCATGAC GCGGGCGCCC GGCGCGCCCC CGGGGACCGC CACCAGCGGC
GACGCGGCCC GGCACGTGGT GATGGTGTCG GCGATGGAGG GGCAGTTCTA CCGCGAGCAC
AAGACCGACC GGCACCCGCA CACCAACATG GCGAAGGCGG CGCTCAACAT GCTGGTGCGG
ACCAGCGCGG CGGACTACGC GAAGGACGGG ATCTTCCTGA ACGCGGTGGA CACCGGCTGG
GTGACCGACG AGGACCCGGC CCACCTCGCC GCGCGCAAGG CGGAGGAGCA CGCGTTCTCG
CCGCCGCTCG ACATCGTGGA CGGGGCGGCG CGGATCGTCG CGCCCATCTT CGAGGGCTTC
CGCACCGGGC GGCACCCGGC CGGGCAGTTC TTCAAGGACT ACCGGCCGGT GCCGTGGTGA
|
|---|
| Protein sequence | MATPGDGGGP DLDPADLAAA LRVLARVAED RTVLARVDAD ARVALQRLAG EVARPDLKAR
KKLQKALLKE EHRARRSRDA DLRRDTGIQR LRQAPVFVAP LPALPPPGAD ASGWWPRLPG
AGEGGAGAGA GAPGAEENTG PELSEPRKCY VCKATFRRLH PFYDQLCRAC GDENQARRTA
GADLRGRVAL VTGARVKIGY QAALLLLRAG CSVVALTRFP RDAAARYARE ADFERWRDRL
SIHGVDLRHT PSVELLCQRL EATLPRLDFQ LHNACQTVRR PPGFYAHLLE AEQAPPSALP
PAERALLRDW EAFRDALRGQ GGAAGVTGPA LLSQARSDAD LLLPGRSALE LFPRGVLDQD
LQQVDLRAHN SWRLRLHEVP TLELLEVLLV NATAPFVMAS RLKPLMTRAP GAPPGTATSG
DAARHVVMVS AMEGQFYREH KTDRHPHTNM AKAALNMLVR TSAADYAKDG IFLNAVDTGW
VTDEDPAHLA ARKAEEHAFS PPLDIVDGAA RIVAPIFEGF RTGRHPAGQF FKDYRPVPW
|
|---|
| |