Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_2055 |
Symbol | |
ID | 3888411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 2312338 |
End bp | 2314278 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637863593 |
Product | oligopeptidase F |
Protein accession | YP_465262 |
Protein GI | 86158477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.443818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCACACCC CGATCGCCCT CCTCGCCGCC CTCTCGGTGG CCGCCGCCCC GGCGAAGCCC GCCGCGCCGC GCGCGGCCAC CAGCCGCGCC CAGGTCCCCG ATCGCTACAA GTGGAAGCTC GCCGACCTGT TCCCGAACGA CGCGGCCTGG GCGAAGGCGC GGGCCGACCT CGCCGGCCGG CTCCCCGGCT TCGACCGTCA CCGCGGGCAC CTCGCCGACT CGGCCAGGGC GCTCGCCGAC GCGCTCTCCG AGATGGGCGC GCTGCAGAAC GCGCTCGACC GCGTCTACGT CTACGCCTCG GCCCGCGCCG ACGAGGACAC GCGCGAGCCC GGGGCGCGCG CCATGCGCGC GGAGGCGGAG CGGCTCGCGG TGGACGTGCA GGCGGCGCTC TCCTGGGTGC GCCCGGCGGT GCTGGAGCTG CCGGCAGACA CGGTGAAGCG CTTCCTCGGC GAGGACCCGC GCCTGCGCGA GTGGGCTTTC TTCCTCGACG ACACGCTCCG CTGGAAGCCG CACACGCTCC CCGCCGGCGA GGAGCGGATC GTGGCGAAGA CCGGCGACCT CGACGGCGCC GGGCGCGACG TGCACTCGGT GCTGCTGAAC GCCGACCTGC CCTTCCCCAC CGTGAAGCTC TCCACCGGCG CGGTCCGGCT GGACCAGGCG GGCTACGAGC GCGCGCGCAC CAGCCCGGCG GCCGCCGACC GCGAGAAGGT GTTCCACGCC TACTTCGGCG CGCTGAAGCA GTACGAGCGG ACCATCGGGA CGGCGCTGTA CGCGCAGGTG AAGGCGCACC TGTTCGAGCG GGACGTGCGC CGGTTCGACT CCTCGCTCGC GGCCGCGCTG TTCCGCGACA ACGTCCCCAC CGCCGTGTAC GAGCGCCTGG TCGCCGACGT GAACGCGAAC CTGCCCACCC TGCACCGCTA CCTGAAGCTC AGGCAGCGCA TGCTGGGCCT GCCGGCGCTC CGCTACGAGG ACCTGTACGT GCCGCTCGTG AAGGCGGTGG ACCGCCGCTA CGACGTGGAC CAGGCGGTGG CGCTCACGCT CGACGCGGTG AAGCCGCTCG GCGACGCGTA CGTGTCGAAG CTGCGGGCCG GGCTCCAGGG CGGCTGGACC GACTTCCTGC CGGTGACCGG CAAGCGGGCC GGCGCGTACT CCACCGGCGT GTACGGCGTG CACCCGTACC AGCTCCTCAA CTTCAACGGG CAGTGGACCG ACGTCTCCAC GCTGGCGCAC GAGGCCGGCC ACTCGATGCA CACGGTGCTG GCGTTCGAGA AGCAGCCCTA CGCCACGTCG AACTACGCCA CGTTCGTGGC CGAGGTCGCC TCCACGCTGA ACGAGAACCT GCTGTTCCGC CGCGCCATCG GGCAGGCGAA GGACGACGGG GAGCGGCTGG CGCTGCTCGG CAACCGGCTC GAGTCGCTGC GCACCACGCT CTTCCGCCAG ACCATGTTCG CGGAGTTCGA GCTCGCCATC CACCAGCTCG CCGAGAAGGG CGAGGCGCTC ACCGGCGAGA GGATGAGCGC GCTGTACCTG GGGCTGGTGC GCAAGTACTA CGGGCACGAC GCCGGCGTCT GCCAGGTGGC CGACCTCTAC GGCGCCGAGT GGACGTACAT CCAGCACTTC TTCCACTACG ACTTCTACGT GTACCAGTAC GCCACCAGCC TGGTCGCCTC CACCGCCATC GCCCGGGCCA TCCGCGAGGA CGAGGCGCAG GGGCGCACCG GCGCGCGCGA CCGCTACCTG GCCATGCTCG CCGCGGGGGG CTCGCGCTAC CCGGTGGACC TGCTGCGCGA GGCGGGGGTG GACATGACCA CGCCCGCGCC GTTCGCGGCC GCCATGGAGG AGATGAACGC CACCATGGAC GAGATGGAGC GGATCCTGAA GCGGAGCCCG GGGGCGGCCG GCGTGCGGGC GGCGCCCGCG AAGCCGGCCA AGGGCCGCTA G
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Protein sequence | MHTPIALLAA LSVAAAPAKP AAPRAATSRA QVPDRYKWKL ADLFPNDAAW AKARADLAGR LPGFDRHRGH LADSARALAD ALSEMGALQN ALDRVYVYAS ARADEDTREP GARAMRAEAE RLAVDVQAAL SWVRPAVLEL PADTVKRFLG EDPRLREWAF FLDDTLRWKP HTLPAGEERI VAKTGDLDGA GRDVHSVLLN ADLPFPTVKL STGAVRLDQA GYERARTSPA AADREKVFHA YFGALKQYER TIGTALYAQV KAHLFERDVR RFDSSLAAAL FRDNVPTAVY ERLVADVNAN LPTLHRYLKL RQRMLGLPAL RYEDLYVPLV KAVDRRYDVD QAVALTLDAV KPLGDAYVSK LRAGLQGGWT DFLPVTGKRA GAYSTGVYGV HPYQLLNFNG QWTDVSTLAH EAGHSMHTVL AFEKQPYATS NYATFVAEVA STLNENLLFR RAIGQAKDDG ERLALLGNRL ESLRTTLFRQ TMFAEFELAI HQLAEKGEAL TGERMSALYL GLVRKYYGHD AGVCQVADLY GAEWTYIQHF FHYDFYVYQY ATSLVASTAI ARAIREDEAQ GRTGARDRYL AMLAAGGSRY PVDLLREAGV DMTTPAPFAA AMEEMNATMD EMERILKRSP GAAGVRAAPA KPAKGR
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