| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2010 |
|---|
| Symbol | |
|---|
| ID | 3887099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 2250302 |
|---|
| End bp | 2250844 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637863548 |
|---|
| Product | peptidase, zinc-dependent |
|---|
| Protein accession | YP_465217 |
|---|
| Protein GI | 86158432 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1913] Predicted Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA TCTTCATCTG GTGGATCGGC GAGGCGGCGC CCGACCGGGC GTTGCTGGAC
CATGCCGCGC TGCACCTGGG CCGCGCCTTC GGGCGGCCGG TGCGGGAGTG GAGCTCGCCG
GAGCGCCCGC GCCACGCGTA CGACCCGAAG CGCAAGCAGC ACCTCTCCGG CGCGATCCTG
AAGTGGCTGC TGGAGGCCGG GCCGGGCGCA GGGAAGGTGC TCGGGGTGAC CGACCGCGAC
CTGTTCATCC CCATCCTCAC CTACGTGTTC GGGGAGGGGC AGCTCGGGGG CGGCGCGGCG
GTGGTCTCCA TCGCGCGCCT GCTGGAGGAC GTGGAGCTGA TCGGGCCGCA GCTGCTGCTG
GAGCGGCTCG CCAAGGAGGC GGTGCACGAG GTCGGGCACG CGTTCGGCCT GCTGCACTGC
GCGACGCCGG TGTGCGTGAT GGCGCGCTCG TCCGGCGTCC GCAACGTGGA CGAGAAGAAG
CCGGAGCTCT GCTCCGAGTG CCGACGCAGG CTCGAGGAGC TGCAGACCGG AGGTCCCAGG
TGA
|
|---|
| Protein sequence | MDPIFIWWIG EAAPDRALLD HAALHLGRAF GRPVREWSSP ERPRHAYDPK RKQHLSGAIL
KWLLEAGPGA GKVLGVTDRD LFIPILTYVF GEGQLGGGAA VVSIARLLED VELIGPQLLL
ERLAKEAVHE VGHAFGLLHC ATPVCVMARS SGVRNVDEKK PELCSECRRR LEELQTGGPR
|
|---|
| |