| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1776 |
|---|
| Symbol | |
|---|
| ID | 3887357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 2034615 |
|---|
| End bp | 2035997 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637863313 |
|---|
| Product | RNA-metabolising metallo-beta-lactamase |
|---|
| Protein accession | YP_464986 |
|---|
| Protein GI | 86158201 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.904116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCA TCCGCTTCCT CGGCGCGGCA GGCACGGTGA CGGGCTCACG GTTCCTGGTG
GAGACCGGCT CGGTCCGGGT CCTGGTGGAC GCCGGGCTGT TCCAGGGCCA CAAGGAGCTG
CGCCTCCGGA ACCGCGCCCC CTGGCCGGTC TCCCCGCGAT CGCTGACGGC GGTGGTCCTG
ACGCACGCGC ACGTGGACCA CAGCGGGGCG CTGCCGCTGC TGGGGCGCCA GGGCTTCCGC
GGCCCGGTCC ACTGCACCCC GGCCACCCGC GACCTGGCGG GCCTGCTCCT CCCCGACTCC
GGGAGGCTCC AGGAGGAGGA GGCGCGCTAC GCCAACCGGA AGGGCTACTC GAAGCATGCG
CCCGCCCTCC CCCTCTACAC CGAGCAGGAC GCGCTCGAGG TCCTGCCCCA GCTCGCGCCG
CTGCAGTACG CCGAGCCTCG CCAGATCGCG CCCGGCGTGA CCCTCCGCCT CCACCGCGCC
GGGCACATCC TGGGCAGCGC GCTGGCGGAG GTGAGCGTGG GGGGCGCGCG CGGGGTGCGG
CTCCTGTTCA GCGGCGACCT GGGCCGCTAC GGCGCCCCCA TCCTCCCGGA CCCGGAGCCC
GGGCCCGCCG CCGACGCGCT GGTGCTCGAG AGCACCTACG CCGGCCGGCG CCACGAGGCG
GGATCGCCCG CCGCGGCGCT CGCGGCCGAG GTCCACGCCG TCGTCCGCTC CGGCGGCGCG
CTGGTCGTGC CGGCGTTCGC GGTGGGGCGC ACCCAGGAGA TCCTGTTCAC GCTGCGTGAG
CTGGAGGACC GCGGCGAGAT CCCGTCCGTC CCGGTGTTCG TGGACTCGCC CATGGCGGTG
GACGCGACGC CGATCTACCT GGCGCACCGC GAGGACCACG ACGACGAGAC CATCCGGCGC
ATCGCGGCCG GCGAGGAGCC GCTCCGGCCC GCGAAGCTGG CGTTCTGCCG CAGCCCGGAC
CAGTCGAAGG CCATCAACGA CGTGCGCGGC CCGTGCGTCA TCCTGTCGGC CTCGGGCATG
GCCACCGGCG GCCGGGTGCT CCACCACCTG GCGCGCCGCC TCCCCGACGC GCGCAACACC
GTCCTGCTGG TGGGCTTCCA GGCCGGCGGC ACCCGCGGCT GGCGCCTGCA GAACGGCGCC
GAGACGCTGC GCATCCACGG CGAGGACGTG CCGGTGAGGG CGCGCGTCGC GACGCTCGGC
GGCTTCTCGG CCCACGCCGA CGAGGCGGAG ATCCGGCGCT GGCTCGCCAC GCTCCCGGCG
CAGCCGCGCC GGACGTTCCT GGTGCACGGC GAGCCGACGG CGCTGGCCGC GGCCAAGGCG
CGGATGGACG AGATGGGCTG GCCCGCGCTC GTCCCCTCGC ACCTCGAGGA GGTCCGGCTG
TGA
|
|---|
| Protein sequence | MTSIRFLGAA GTVTGSRFLV ETGSVRVLVD AGLFQGHKEL RLRNRAPWPV SPRSLTAVVL
THAHVDHSGA LPLLGRQGFR GPVHCTPATR DLAGLLLPDS GRLQEEEARY ANRKGYSKHA
PALPLYTEQD ALEVLPQLAP LQYAEPRQIA PGVTLRLHRA GHILGSALAE VSVGGARGVR
LLFSGDLGRY GAPILPDPEP GPAADALVLE STYAGRRHEA GSPAAALAAE VHAVVRSGGA
LVVPAFAVGR TQEILFTLRE LEDRGEIPSV PVFVDSPMAV DATPIYLAHR EDHDDETIRR
IAAGEEPLRP AKLAFCRSPD QSKAINDVRG PCVILSASGM ATGGRVLHHL ARRLPDARNT
VLLVGFQAGG TRGWRLQNGA ETLRIHGEDV PVRARVATLG GFSAHADEAE IRRWLATLPA
QPRRTFLVHG EPTALAAAKA RMDEMGWPAL VPSHLEEVRL
|
|---|
| |