| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1189 |
|---|
| Symbol | |
|---|
| ID | 3888620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 1377796 |
|---|
| End bp | 1378767 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637862717 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_464400 |
|---|
| Protein GI | 86157615 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.315896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC GCCTCCTCCC CTTGCTCCTC GCGCCCGTCG CGCTCCTGGC CGCCTGCGGC
CAGCGCGCGC CGGCGCCCAT CACCGGCCTC GTGGACGCGA CCGAGATCGA CGTCGCCTCG
AAGATCCCCG GCCGCGTGAA GGCGCTGGCG GTGCGCGAGG GCGACCCGGT GAAGGAGGGC
CAGGAGCTCG TCACCATCGA GAGCCAGGAG GTCGCCGCGA AGATCGACCA GGTGAAGGCG
GCGGTGGACG CCGCCCGCGC CCGGCTGCAG ATCGCCGAGC GCGGCGCGCG CGCCGAGGAG
CGGCAGCAGG CGCGCCGCGC GCTCGACACC GCCCGCAGCC AGCTGGAGGT CGCCACCAAG
GCGCACGAGC GCGCCACCGC CCTGCTCGCC ACCGGGACCA TCACCCAGGC CGCCTTCGAC
GAGGCCGACT TCAAGTTCAA GGCCGCCCGG GACCAGCTCG CGGTGGCGCA GGCCCGCCAC
GACCTGGTGA TCAAGGGCGC CCGCGCCGAG GAGGTCGAGG CGCTGCGCGC GCTGGTCCGC
CAGGGCCAGG GCAGCCTGGC CGAGGTGGAG AGCTACGGCC GCGAGACGGT CCAGACCGCG
CCCATCGGCG GCGAGGTGGC GAAGATCCTG GTCCACCGCG GCGAGCTCGC CGCCACCGGC
TACCCCATCC TCACGCTCGT GGACCGGAGC GACGCCTGGG CGGTGTTCCC GGTCCGCGAG
GACCTGCTCG GCGCGGTGAA GGTCGGGACC GAGCTCGACG TCGAGGTCCC GGCGCTGCGC
CGGCGCCTCC CCATGACCGT GTTCTCGGTG GCCCCGCTCG GCGACTTCGC CACCTGGCGC
GCGACCGGCG AGAAGGGCAG CTTCGACCTG CGCACGTTCG AGGTGAAGGC CCGGCCGCGC
CAGCCGGACC CCGAGCTGCG CCCCGGCATG ACCGCGCGCT TCGCGCCCGC CCTGCCCGCG
GCCCGGAGGT GA
|
|---|
| Protein sequence | MTRRLLPLLL APVALLAACG QRAPAPITGL VDATEIDVAS KIPGRVKALA VREGDPVKEG
QELVTIESQE VAAKIDQVKA AVDAARARLQ IAERGARAEE RQQARRALDT ARSQLEVATK
AHERATALLA TGTITQAAFD EADFKFKAAR DQLAVAQARH DLVIKGARAE EVEALRALVR
QGQGSLAEVE SYGRETVQTA PIGGEVAKIL VHRGELAATG YPILTLVDRS DAWAVFPVRE
DLLGAVKVGT ELDVEVPALR RRLPMTVFSV APLGDFATWR ATGEKGSFDL RTFEVKARPR
QPDPELRPGM TARFAPALPA ARR
|
|---|
| |