| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0884 |
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| Symbol | |
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| ID | 3886622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | + |
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| Start bp | 1021930 |
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| End bp | 1024110 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 637862405 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_464096 |
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| Protein GI | 86157311 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.911309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACC CGGGCCGGAC CCCGGAGCCG TTCGGCGGCC GCGGGCCCGG CGACGGCGAG
CCCGGCCCGG CGCGGGCGTT CGTGGTGCAG AAGCACGCGG CCCGGCGGCT CCACTGGGAC
TTCCGGCTGG AGCTGGGCGG CACGCTGCGG AGCTGGGCCG TGCCGAAGGG CCCGTCCGCG
GATCCGTCCG ACCGCCGCAT GGCGATCGAG GTCGAGGACC ACCCCGTCGA GTACGCCGAC
TTCGAGGGGA TCATCCCGGC GGGAAACTAC GGCGCCGGGG CCGTGATCGT GTGGGATCGC
GGCGCGTGGT GGCCGGTGGG CGATCCCGAG GACGGGCTGG CCCGCGGCAA GCTGGTGTTC
CGGCTGCGCG GCCACAAGCT GCACGGAGAG TGGACGCTGG TCCGGACCCG CGCCGCGGAG
GGCGGGAAGC GCGAGTGGCT GCTGCTGAAG CACCGCGGCG ACCCGTTCGC CGGGCCGGGG
CGGCCGTTCC CGGAGGCGTC GGTGCTCTCC GGCCGAACGG TGGAGGAGCT CGCGGCCGGG
ACGAGCCGGG CCGAGGCGGC CGCGCGCGAG GCCGCGCGCC TCGGCGCGCC GGAGCGCCCG
CTCCCGGCGC GAGGGGTGGC GCCCATGATG CCCGGCGCGC GGCGCCCGCC GTTCGACCGC
GCGGGCTGGA TCTTCGAGGT GGCGCAGGGA GGCCAGCGCG TGTCGGCGCG CCGCGAGGGC
ATGGGGGCGG TGCTGCGCAC GCCGGGGGGC GAGGAGCTCG CCGCGCGCTT CCCCGAGGTG
GCGCTCGCCG TGGCGCTCCT GCCGGCGGAT CCGGTGCTCG ACGGGGAGCT GGTCGTGCTC
GACGACGACG GACGCGCGTC GCCGGAGGCG CTGGAGGCGC GCGCCCGGGC CGCCACGGGC
GCGGCCGCAG GCGCCGCGCT GGAGCGGCCG GCGACCCTGT TCGCGTTCGA CCTGCTGGCG
CTGGGCGGGC GCGACCTGCG CCGCCTGGCG CTCGCGGATC GCAAGCGGCT GCTCGCCGAG
GTCGCGCCGG CGGTCGGGGC GGTGCGCTTC GCCGGCCACG TCGAGCGGGC GGGGCGCGCG
CTCCACCGCG AGGCGGAGCG CCGGGGCCTC CCCGGCGTGC TCGCCCGCCG CGCCGCGGCG
CCCTACCGGG CAGGCCGATC CGCCGACTGG GTCCTCGTGC CGGCCGCTGC AGGCCCTGCG
CCGCGCCGCC CGCCGCCGGG CGTCCGGTCG AGGCCGCCGG CCGCGCCACG CTCCCGCGGG
CCGGAACGCA GCGTGAACGT GACCCACCCG GAGAAGGTCT GCTTCCCGGA GGACGGGATC
ACCAGGGGCG ATCTGCTCGC CTACCACCGG GCCATCGCGC CGTTCATGCT GCCGTTCCTG
GCCGACCGTC CGCTGGTGCT CACCCGCTTC CCGGACGGCA TCCACGGCCG GAGCTTCCTC
CAGGAGGACG CGCCCGCGTG GCGGCCGTCC TGGCTGCGCG CGGTGCCGGT GCACGCGGAG
GGCGGCCGCG CCGCCGAGCA CCTCGTGGTG GACGACGCCG ACGGCCTCGC CTGGCTGGTG
AACCAGGGGG CGATCCCCTT CGACGTGCTG GCGGGCCGCG CGGGCGCGCT GGAGCGGCCG
GACTGGTGCG TGGTGGAGCT CGACGCGGCC GGCGCGCCGT TCGCGCAGGT GGTGCGGGTG
GCGCGCGCGC TCCACGCGCT CTGCGCCGCC GCCGGGCTGC CGAGCCACGC GAAGACCGCC
GGGGAGCGGG GGCTCGACGT GCTCGTCCCG CTCGGCGGCC AGCTCACGCA CGCGCAGGCG
CGGACGCTGG CCGAGCTGCT GGCGCGGACG GTCGAGGCGG AGCTGCCCGG GCTCGCCACC
ACCGCCCGCA CGGCCGCGGC GCGCGGCGGA CGCGTGCACC TCGACTGCCT GCGGAACGGC
CACGGCGCGG CCATCCCGGC GCCCTACACG GTCCTGCCGC GGCCGGGCGC GCCGGTGTCC
ACGCCGCTGC GCTGGAGCGA GGTGAACGCC CGCCTCGACC CGGCGCGGTT CACCGTCCGG
ACCGTTCCCG CGCGCGCGGC CCGGCTCGGC GCGGATCCGC TCCGGCCCGT CCTGACCGAG
CGCCCCGACC TGCTGCGCGC GCTCGCGCGC CTGCGGGCGC GGCCGGGTGC GGCCGGCCGG
CGCGCCGCTC GCCGGCCTTG A
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| Protein sequence | MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR SWAVPKGPSA
DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR GAWWPVGDPE DGLARGKLVF
RLRGHKLHGE WTLVRTRAAE GGKREWLLLK HRGDPFAGPG RPFPEASVLS GRTVEELAAG
TSRAEAAARE AARLGAPERP LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG
MGAVLRTPGG EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG
AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF AGHVERAGRA
LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA PRRPPPGVRS RPPAAPRSRG
PERSVNVTHP EKVCFPEDGI TRGDLLAYHR AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL
QEDAPAWRPS WLRAVPVHAE GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP
DWCVVELDAA GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA
RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT VLPRPGAPVS
TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE RPDLLRALAR LRARPGAAGR
RAARRP
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