Gene Adeh_0784 details

Gene Information

• Locus tag: Adeh_0784
• ID: 3886620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: -
• Start bp: 904718
• End bp: 906694
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 637862305
• Product: ATP dependent DNA ligase
• Protein accession: YP_463996
• Protein GI: 86157211
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1793] ATP-dependent DNA ligase; [COG3285] Predicted eukaryotic-type DNA primase
• TIGRFAM ID: [TIGR02776] DNA ligase D; [TIGR02778] DNA polymerase LigD, polymerase domain; [TIGR02779] DNA polymerase LigD, ligase domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCCGCG CGCCCGTCCC GACCTACCGC GCCCAGCTCG CGACCCTCGT CGCGGCCCCG 
CCGGCCGGCG CGGGCTGGGT GCACGAGACG AAGTACGACG GGTATCGCAT CGGCTGCGCG 
CTCGAGGGCG GGCGCGCCAC GCTGTGGAGC AGGCGCGGCA ACGACTGGAC CGCGCAGTTC 
CCGGAGGTGG CGCGCGCCGC CGAGGCGCTC CCAGTGCGGA GCGCGCTGCT CGACGGCGAG 
GTCGCCGCGG TGCTGCCCGG CGGCCGGACC AGCTTCCAGG CGCTCCAGCA GGCGTTCTCC 
GGCGGGCGCC GCTCGCTCGC CTACTTCGTG TTCGACCTGC TCTGGCTCGA CGGCGAGGAC 
CTCTCCCGGC GCCCGCTGCT CGAGCGCAAG GACGCGCTGC GCCGGCTGCT CGGCGCGCGC 
CGCGAGGTGC TCCGCTACGC GCCGCACGTG GACGCGCCCG GCGCCGAGGT GCTCCGCGAG 
GCGTGCCGCC TCGGCCTGGA GGGGATCGTC TCGAAGCGCG CCGACGCGCC GTACCGGCCC 
GGGCGGAACA CCACCTGGAC GAAGGCGAAG TGCCTCGCCC GCCAGGAGCT GGTGATCGGC 
GGCTTCACCG ATCCCGAGGG CAGCCGCCAG GGCATCGGGG CGCTGCTGGT GGGCTTCCAC 
GAGGGCGGCG CGCTGCGCTT CGCCGGGAAG GTCGGCACCG GCTTCACGCA GGCGTCGGCG 
CGGGCGCTGC GCGCGCGCCT GGATCGCCTG GAGCGCACCG ACCCGCCCTT CACGCCACGC 
CCGCCCGGCG CGCTCGGCCG GATCGCGCAC TGGGTCCGGC CGGAGCTGGT CGCCGAGGTG 
GCGTTCGCCG AGTGGACCGA CGACGGGAAG GTGCGCCACC CGTCGTTCCA GGGGCTGCGC 
GAGGACAAGC GCGCGGCGGA CGTCGTCCGC GAGCGCCCCG GCGCCGGCGC GCCGCCGCCC 
GCGGCCGCCT CCCCGCCGCC GCAGGCGCCC GGCGCCGGCG GCCCCGCGCG GCGGCGCCGC 
CCGGCGGGCG GACCGGGCGA GGTGGTGATC GGCGGCGTCC GCCTCTCGCA CCCGGAGCGC 
CTGGTGTTCC CGGGCGAGGG GCGGACCGGG CTCACCAAGG CGGACGTGGC CCGGTACTAC 
GACGCGGTGG CCGGCGCGAT GCTGCCGCAC CTGCGCGGCC GGCCGCTCAC CCTGTTCCAC 
TGCCCGCAGG GCCTCTCCGG CGAGTGCCGC TTCATGAAGC ACTCGAAGAC CTGGGCGCCG 
CCCGCGGTGC GGCGCGTTCG CATCCAGGAG AAGACGAAGC TGGGCGAGTA CCTGATCGCC 
GACGACCGCG CGGCGCTGCT CTCGCTCGTG CAGCTGGACG TCCTCGAGCT GCACACCTGG 
AACGCGACCG CGGACGCGCT GGAGACGCCG GACCGGATCG TGCTCGACCT CGACCCGGGG 
CCGGCGGTCC CCTGGCCGGA GGTGGTGCGC GCGGCGCGGC TGCTGCGCTC GGCGCTGGAG 
GCGCTGGGGC TCGCCGCGTT CGTGAAGACC ACCGGCGGCG CCGGGCTGCA CGTGGTGACC 
CCGCTCGTGC CCCGCCGGCG CTGGGAGGAC TGCCTCGCGT TCGCGCGGGG CCTCGCCGCC 
ACGGTGGCGC GCCACGAGCC GCGCGCGTTC ACGGTGGCGT TCGCGCGCGC GGGGCGCGAG 
CGGAAGATCC TGCTCGACTA CCTGCGGAAC AACCGGACCA ACACCTCGGT GGCGGCGTTC 
TCGCTCCGGG CGCGGCCGGG CGCGCCGGCG TCGGTGCCGG TGGCCTGGGA CGAGCTGGGG 
CCGCGGCTGC GGCCGGAGCG GCTGGGGGCG CGGACGGTCC CGCGGCGGCT GGCGCGGCTC 
GGCGCCGACC CGTGGGCCGG GTACGCGCGC GCCGCCCGGC CGCTCGCCGA CGCCCACCTG 
GCCGCGGTGG GCGCCGCGCC GGCGGCCGCG CCGGCGCGCG GCGGGGGGCG GCGGTGA 

 

Protein sequence

MARAPVPTYR AQLATLVAAP PAGAGWVHET KYDGYRIGCA LEGGRATLWS RRGNDWTAQF 
PEVARAAEAL PVRSALLDGE VAAVLPGGRT SFQALQQAFS GGRRSLAYFV FDLLWLDGED 
LSRRPLLERK DALRRLLGAR REVLRYAPHV DAPGAEVLRE ACRLGLEGIV SKRADAPYRP 
GRNTTWTKAK CLARQELVIG GFTDPEGSRQ GIGALLVGFH EGGALRFAGK VGTGFTQASA 
RALRARLDRL ERTDPPFTPR PPGALGRIAH WVRPELVAEV AFAEWTDDGK VRHPSFQGLR 
EDKRAADVVR ERPGAGAPPP AAASPPPQAP GAGGPARRRR PAGGPGEVVI GGVRLSHPER 
LVFPGEGRTG LTKADVARYY DAVAGAMLPH LRGRPLTLFH CPQGLSGECR FMKHSKTWAP 
PAVRRVRIQE KTKLGEYLIA DDRAALLSLV QLDVLELHTW NATADALETP DRIVLDLDPG 
PAVPWPEVVR AARLLRSALE ALGLAAFVKT TGGAGLHVVT PLVPRRRWED CLAFARGLAA 
TVARHEPRAF TVAFARAGRE RKILLDYLRN NRTNTSVAAF SLRARPGAPA SVPVAWDELG 
PRLRPERLGA RTVPRRLARL GADPWAGYAR AARPLADAHL AAVGAAPAAA PARGGGRR