| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0686 |
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| Symbol | |
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| ID | 3889493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | - |
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| Start bp | 795810 |
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| End bp | 798503 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637862207 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_463899 |
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| Protein GI | 86157114 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.433191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC TCCTCGCCAC GACGTTGCTC GTCCCGGTGC TCGCCGCCGC GCAGGTCCCG
CTGCGCCCGA CCGACGACCC CGAGTCGCCG GCCCGGCCGC GCCCGACGCG GCCCACCTCT
CCGCCGACCG GCATCCCCAC CACGCCGCCG CCTCCCGGGA CCTCGATCGG CCCCGGCGGC
GTGGCCCCGA TCCAGCAGAA CGGCGCGCGC CCGCCCGCGG GCCGGCCCAC CTCGCCGGCC
CCGCGCCCGG GGGGCGCGGC CACGCCCACC CCGGCGCCCG CGCGCGGCGG CGGCGGCGAG
GCCGAGACCA CGCTGCAGGC CGCGAACGGC AAGTGCGTCC CGATGCAGGG GCGCTTCATG
CTGACGTTCA ACCGGGCCGA GGTGGTGGAC GTGCTCGAGC AGGCCAGCCG CTGGACCTGC
CGCAACTTCA TCTACACGGA GGACGTGGCG CGCGGGAAGA TCACGCTGCT CTCCAAGACG
CCGGTCACCG CCGAGGAGGC CTACGCCGCG TTCCTCGCCG CGCTGAACGC GAACAGCATC
ACCGTCTACC CGACGGGCCG GTACTGGCGC CTGGGCCGCG CCGCCGACAG CAAGAAGATG
CCCATCCCGA CGTACACCGA CCCGGAGAGC GGCACGCCGG CGAACGAGCA GGTCATCACC
AAGGTGATCC GCCTGCAGTA CGCCGACGCC GACCAGCTCC GCGGGGTGAT GGGCAACTTC
ATCTCGCCGC AGGGCGCGGA CATCCAGTCG ATCCCGCCCT CGACGCTGGT CATCACCGAC
ACCGGCCTCA ACATCCGCCG CATCGAGAAG ATGCTCGAGG CGATCGACAA GGTCGGCGGC
GGCGACCTGG TCCGCATCGT CCAGGTGCGC TACGCGTCCG CGAAGGACCT CGCCGACAAG
GTGAACCAGA TCTTCCAGGC GCAAGGCGGG CGGGGCGCGC GCCCGGCGCG CATCACCAGC
GGCCCGGCGC GGCCCGGCGT CCCCACCACG CAGCCCGCGG GCGGATCGGT CGAGGTCTCC
GTCTACAAGG TCCTCCCCGA CGACCGCACC AACAAGCTCA TCGTCATCGC GGACGAGAAG
AGCTTCCAGC AGATCATGGA GCTGGTGCAG CAGCTCGACG TGCCCACCAG CGCCGACGGC
GGCGTCCACG TCCTGTTCCT GAAGAACGCG AACGCGGAGG AGCTCGCCAC CACGCTCTCC
AACCTGGCGC AGGGCCAGGC CAAGCGCACC ACCACGCCCG GCGCGCCGAC GCAGCCGGCG
GCGCGTCCGG GGATGCCCGG GGCGCCGCCC GCGGCGGCGC CCGCGCCGGC CGGCGACGTC
ACGGCCGAGC TGTTCTCCGG CGAGGTGAAG ATCACCGCGG ACAAGACGCA GAACGCGCTC
CTCGTGCAGG CGAGCGGGGC CGACTTCTCC GCGGTCCAGC GCCTCGTCGA GAAGCTCGAC
CGCCCGCGGC GCCAGGTGTT CGTCGAGGCG GTGATCATGG AGGTGAACCT CAAGAACTCC
ATGGAGCTCG GCGTCAGCGC GCACGGCGCC ATCCCGTACA AGTACAAGGG CGACACCGGC
GTCATCCCCC TCTCCTCGCA GACCGGGCGC GTGTCGTCGC TCGACATGTC GAGCGCGATC
GCGCTGGGCG GGTTCCTCAC CGGCTACACC GGCCCCATCT CCGCGGAGCT GAAGGACCTG
GGCTTCGGCA ACATCCCCAG CCTCGGCCTG CTCATCCAGG CGCTGCAGTC CAACTCCGAC
GTGAACGTGC TCTCCACGCC GCACCTGCTC GCCACCGACA ACGAGGAGTC GGAGATCACG
GTCGGCCAGA ACGTGCCGTT CCAGTCCGGC TACGCGCCCC AGGGGCTCTC CAACCTGCTC
TCCGGGTCCG GCACGGGCGG CAGCAGCACC GTCGGCGCGG CGCTCGGCAC CCAGGGCCTT
GGCTCGCTCT ACGCGCCGAT CCAGCGGCAG AACGTGGAGC TGAAGCTCAA GATCAAGCCG
CAGATCAACG AGGGCGGGAA CATCCGGCTC ACCATCGAGG AGCAGACCGA GGAGATCGCG
GAGAAGGACC CGCAGCTCGG CCCGACCACC GCCAAGCGCA GCGTCAAGAC GCAGATCGTG
GCGCGCGACC AGAGCACGAT CGTGATCGGC GGCCTCATCC AGGACCGCGC CATCCGCAGC
GTGTCCAAGA TCCCGTTCCT GGGCAGCCTG CCCATCCTCG GGTGGCTGTT CCGCGACACC
ACCACCACCA AGCAGAAGGT GAACCTCCTG CTCTTCCTCA CGCCGTACAT CATCCGCGAC
GAGGCGGACT ACCGGCGCAT CTACGAGAAG AAGCGCGAGG AGCAGCAGCA GTTCATCGAG
CAGTTCTACG GCCGCCAGCC TCGCTACGAC GTGGACGTGG ACTTCAGCCG GAAGACCGGG
CCCTACTCGC GGCTGCGCCA GGGCGTCAGC CAGGAGACCT CGCGGATCGA GAACGGCGGC
GGCGGCGCGC CGGGCGAGTA CCTGTCCGCT CCCCCCGCCG GCGGCCCGCC GCCGACCACC
GTCGTCCCGG TGCCGCGCCC GAGCTCCCCC GCGCCCGCGC CCGAGCCGGA GGCCGCGCCC
GACGCGGCGC CGCCGCCCGA GGGGACGCCC GAGCCGATCG AGCGCCTCTC GCCGCAGCAG
GCGCCGCCCG CCGGCGAGCC GGCGTCGCCG GGAGGGACCC CGCCGCAGGA ATGA
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| Protein sequence | MKKLLATTLL VPVLAAAQVP LRPTDDPESP ARPRPTRPTS PPTGIPTTPP PPGTSIGPGG
VAPIQQNGAR PPAGRPTSPA PRPGGAATPT PAPARGGGGE AETTLQAANG KCVPMQGRFM
LTFNRAEVVD VLEQASRWTC RNFIYTEDVA RGKITLLSKT PVTAEEAYAA FLAALNANSI
TVYPTGRYWR LGRAADSKKM PIPTYTDPES GTPANEQVIT KVIRLQYADA DQLRGVMGNF
ISPQGADIQS IPPSTLVITD TGLNIRRIEK MLEAIDKVGG GDLVRIVQVR YASAKDLADK
VNQIFQAQGG RGARPARITS GPARPGVPTT QPAGGSVEVS VYKVLPDDRT NKLIVIADEK
SFQQIMELVQ QLDVPTSADG GVHVLFLKNA NAEELATTLS NLAQGQAKRT TTPGAPTQPA
ARPGMPGAPP AAAPAPAGDV TAELFSGEVK ITADKTQNAL LVQASGADFS AVQRLVEKLD
RPRRQVFVEA VIMEVNLKNS MELGVSAHGA IPYKYKGDTG VIPLSSQTGR VSSLDMSSAI
ALGGFLTGYT GPISAELKDL GFGNIPSLGL LIQALQSNSD VNVLSTPHLL ATDNEESEIT
VGQNVPFQSG YAPQGLSNLL SGSGTGGSST VGAALGTQGL GSLYAPIQRQ NVELKLKIKP
QINEGGNIRL TIEEQTEEIA EKDPQLGPTT AKRSVKTQIV ARDQSTIVIG GLIQDRAIRS
VSKIPFLGSL PILGWLFRDT TTTKQKVNLL LFLTPYIIRD EADYRRIYEK KREEQQQFIE
QFYGRQPRYD VDVDFSRKTG PYSRLRQGVS QETSRIENGG GGAPGEYLSA PPAGGPPPTT
VVPVPRPSSP APAPEPEAAP DAAPPPEGTP EPIERLSPQQ APPAGEPASP GGTPPQE
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