| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0685 |
|---|
| Symbol | |
|---|
| ID | 3889492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 793977 |
|---|
| End bp | 795776 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637862206 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_463898 |
|---|
| Protein GI | 86157113 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACG ACGCACAGAT CGACACCGCC CGGACCGCCG TCCAGGGCGC AGTCCCCGGG
CTCGCCGCCG CGGCGGGCCT CTCCGGCCGC CCCATCGGCG AGATCCTCCG GGAGACCGCC
GGGCTGGACC CGGCGCGGCT CGAGGAGGCG CTCGCGCTGC AGCGCGGCGA GCAGGCCGGG
CAGCGCCTCG GCGAGATCCT CGTCCGCCTG AAGGCCGTCA CCGAGGAGGA CGTGCTGCGC
GCGCTCGCGG CCCAGCTCGA CCTGCCCTTC GTCGAGCGCA TCGACCCCGA GTCGGTGCCC
GGAGACCTCG CGGCCAAGGT GCCCATCCAC TTCGCGAAGC AGTCGAAGGT GCTGCCGCTC
GGCACCGCCG GCGACGCGAT CCGGGTGGCG GTGGGCGACC CGCTCGACAC CGCCGCACAG
GACTCGGTGT CGATGCTGCT CGGCGCCGCC GTGGCGCCGG AGGTGGCGCC GCCGCAGGTG
GTGCTCGACG CCATCAACGC GGTGTACGAC CGCGCCGCCG ACGAGCACGA CAAGCTCATG
GAGGACCTCG AGACCGAGGA CCTCGAGAGC GTCGCGCACG AGCTGCAGGA GCCGACCGAC
CTCCTCGAGG CGGACGACGA GGCGCCCATC ATCCGCCTGG TCAACTCGCT CCTGTTCCGC
GCGGTGAAGG AGCGCGCCAG CGACATCCAC ATCCTCCCGG AGGAGAAGGA CATCTCGGTG
CGCTACCGGA TCGACGGCGT GCTCCGCGAG GTGATCCGCC CCCCGAAGCG CTTCCAGGCC
TCCATCGGCA GCCGCATCAA GATCATGGGC GGCCTGAACA TCGCCGAGAA GCGGCTGCCG
CAGGACGGCC GCATCCGGAT CAAGATCGCC GGCAAGGACG TGGACATCCG CCTCTCCACC
GTGCCGACCG CGCACGGCGA GCGGATCGTG ATGCGCCTCC TCGACAAGTC CAACGTGGTG
CTGGACCTGG CCGAGCTCGG CTTCGAGGAC TGGCAGCTCA AGGTGATGGA CACGCTCATC
ACCCGCTCGC ACGGGATCGT GCTGGTCACC GGCCCCACCG GCTCCGGCAA GACCACCACG
CTCTACGCGG CGCTCGCGAA GATCAACTCG CCCGACCTGA ACATCCTCAC CATCGAGGAT
CCGGTCGAGA TCCCGCTGAA GGGCGTGGGC CAGGTGCAGG TCAACCCGAA GATCGACCTG
ACCTTCGCGA GCGGGCTGCG CTCGTTCCTC CGGCAGGACC CGGACGTCAT CATGGTCGGC
GAGATCCGCG ACCTGGAGAC CGCCGAGATC GCGATCCAGG CCTCCCTCAC CGGCCACCTG
GTGCTCTCCA CCGTGCACAC CAACGACGCC GCCGGGGCCA TCACGCGCCT GGTGGACATG
GGCGTGCAGC CGTTCCTGGT GGCCTCCTCG CTGGTGGGCG TGCTGGCCCA GCGCCTGGTG
CGCGTGCTCT GCACGACCTG CAAGAAGCCC TACGTCCCGA CCGTCGAGGA GCGCGCGCTC
GCCGGCCTCA CGCCCGAGAT CCTCCGCAAG GCCGGCGACC CGACCCACCT CTACAAGGCG
GTGGGGTGCC CGGCCTGCAA CCACACCGGC TACCAGGGCC GGACCGGCAT CTACGAGCTG
ATGATGGTGG ACGACGACGT CCGCCCGCTC ATCCTCAAGT CGGTGGACGC CACCACCATC
AAGCGCGCCG CGGTCGAGCG CGGGATGGTG ACGCTCATGG AGCACGGCGC GTACAAGGTC
GCGCGCGGCA TCACCACCGC GGCCGAGGTG CTGTCGGTCA CCGCGGAGGA CATCCGGTGA
|
|---|
| Protein sequence | MPNDAQIDTA RTAVQGAVPG LAAAAGLSGR PIGEILRETA GLDPARLEEA LALQRGEQAG
QRLGEILVRL KAVTEEDVLR ALAAQLDLPF VERIDPESVP GDLAAKVPIH FAKQSKVLPL
GTAGDAIRVA VGDPLDTAAQ DSVSMLLGAA VAPEVAPPQV VLDAINAVYD RAADEHDKLM
EDLETEDLES VAHELQEPTD LLEADDEAPI IRLVNSLLFR AVKERASDIH ILPEEKDISV
RYRIDGVLRE VIRPPKRFQA SIGSRIKIMG GLNIAEKRLP QDGRIRIKIA GKDVDIRLST
VPTAHGERIV MRLLDKSNVV LDLAELGFED WQLKVMDTLI TRSHGIVLVT GPTGSGKTTT
LYAALAKINS PDLNILTIED PVEIPLKGVG QVQVNPKIDL TFASGLRSFL RQDPDVIMVG
EIRDLETAEI AIQASLTGHL VLSTVHTNDA AGAITRLVDM GVQPFLVASS LVGVLAQRLV
RVLCTTCKKP YVPTVEERAL AGLTPEILRK AGDPTHLYKA VGCPACNHTG YQGRTGIYEL
MMVDDDVRPL ILKSVDATTI KRAAVERGMV TLMEHGAYKV ARGITTAAEV LSVTAEDIR
|
|---|
| |