| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0622 |
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| Symbol | |
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| ID | 3888061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | + |
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| Start bp | 715243 |
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| End bp | 716949 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637862143 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_463835 |
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| Protein GI | 86157050 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGAC GGCTCGGCGA ACTGCTGGTG CGGGAGAACC TCATCTCCCT GCAGCAGCTG
CAGAAGGCCC AGGACGAGCA GCGCAAGACC GGAGGGCGCA TCGGCTCGCT GCTCGTGAAG
CAGGGCGCGA TCGCCGAGAG CGACCTCACC GGCTTCCTCT CGAAGCAGTA CGGCGTCCCG
GCGATCTCGC TGAAGGACTT CGACATCGAC GAGGAGGTGC TGAAGCTCGT CCCCAAGGCG
ACCGCGGAGA AGCACCAGGT CATCCCGGTG AACCGCGCCG GCTCCTCGCT CATCGTGGCG
ATGAGCGACC CGTCCAACAT CTTCGCCATC GACGACGTCA AGTTCCTCAC CGGCTACAAC
GTCGAGGTGG TGGTCGCCTC CGAGCAGGCC ATCCGCGAGG CGATCGAGAA GTACTACGCG
GAGAAGGGGC CCGATCTCGA CGAGGTGATG CAGGGCTTCG ACGACTCCGA GGTCGCGATC
ATCGAGGCCG ACGGCGACGA CATGAACGTC GTCGACCTCG AGAAGAGCGC GGAGGAGGCG
CCGGTCGTCA AGCTGGTGAA CCTCATCCTG CTCGACGCCA TCAAGAAGGG CGCCTCGGAC
ATCCACGTCG AGCCCTACGA GAAGGACTTC CGCGTCCGCT TCCGCATCGA CGGCGTGCTG
TACGAGGTGA TGAAGCCGCC CATGAAGCTG CGGAACGCCA TCATCTCGCG CCTGAAGATC
ATGTCGGAGC TCGACATCTC CGAGCGCCGG CTGCCGCAGG ACGGGCGCAT CAAGCTGAAG
CTGGGCAAGG GCAAGGAGAT GGACTTCCGC GTCTCCATCT GCCCGACGCT GTTCGGCGAG
AAGGTGGTGA TGCGCCTCCT CGACAAGTCG AACCTGCAGC TCGACATGAC GAAGCTCGGG
TTCGAGGAGC AGCAGCTCAA GGACTTCATG GAGGCGATCG ACCGGCCGTA CGGCATGGTG
CTCGTCACCG GCCCCACCGG CTCCGGCAAG ACCACCACGC TCTACTCGGC GCTCTCCAAG
CTGAACGAGG TCGCCTGGAA CATCTCCACC GCCGAGGACC CGGTGGAGTT CAACTTCTTC
GGCATCAACC AGGTCCAGAT GCACGAGGAC ATCGGCCTCA ACTTCGCGGC CGCGCTGCGC
AGCTTCCTGC GGCAGGACCC CGACATCATC ATGGTCGGCG AGATCCGCGA CTTCGAGACC
GCCGAGATCG GCGTGAAGGC GGCGCTCACC GGCCACCTCG TGCTCTCCAC GCTGCACACC
AACGACGCGC CCGGCACCGT CTCCCGCCTC CTCAACATGG GCATCGAGCC GTTCCTGGTG
ACCGCGTCGC TGAACGCGAT CGTGGCGCAG CGGCTCTGCC GCCGGCTCTG CCCGGAGTGC
CGCAAGCCGG TGGCGCCCGA CGAGCAGGCG CTGCTCGACG CCGGGTTCCC CGCCGAGCAG
ATCGGCTCGT TCCAGGTGTA CGAGCCGGGC GGCTGCAAGG CCTGCAACGA CCGCGGCTAC
AAGGGGCGCG TGGCGGTGTA CGAGGTGATG CCGCTCTGGG ACGGGCTGAA GGAGCTCGTG
ATCCAGGGCT GCTCCGCCGC CGAGCTGAAG CAGGAGGCGA TCCGCCTCGG CTTCCACACG
CTGCGCATGA GCGCGCTCAA CAAGGTGAAG TCCGGCATGA CCAGCCTCGC CGAGGCGGTC
GGCAACACCG CGCCGGACAA GTTCTAG
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| Protein sequence | MSGRLGELLV RENLISLQQL QKAQDEQRKT GGRIGSLLVK QGAIAESDLT GFLSKQYGVP
AISLKDFDID EEVLKLVPKA TAEKHQVIPV NRAGSSLIVA MSDPSNIFAI DDVKFLTGYN
VEVVVASEQA IREAIEKYYA EKGPDLDEVM QGFDDSEVAI IEADGDDMNV VDLEKSAEEA
PVVKLVNLIL LDAIKKGASD IHVEPYEKDF RVRFRIDGVL YEVMKPPMKL RNAIISRLKI
MSELDISERR LPQDGRIKLK LGKGKEMDFR VSICPTLFGE KVVMRLLDKS NLQLDMTKLG
FEEQQLKDFM EAIDRPYGMV LVTGPTGSGK TTTLYSALSK LNEVAWNIST AEDPVEFNFF
GINQVQMHED IGLNFAAALR SFLRQDPDII MVGEIRDFET AEIGVKAALT GHLVLSTLHT
NDAPGTVSRL LNMGIEPFLV TASLNAIVAQ RLCRRLCPEC RKPVAPDEQA LLDAGFPAEQ
IGSFQVYEPG GCKACNDRGY KGRVAVYEVM PLWDGLKELV IQGCSAAELK QEAIRLGFHT
LRMSALNKVK SGMTSLAEAV GNTAPDKF
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